Photorhabdus thracensis: VY86_14135
Help
Entry
VY86_14135 CDS
T03944
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptt03000
]
VY86_14135
Transcription factors [BR:
ptt03000
]
Prokaryotic type
Helix-turn-helix
Other families
VY86_14135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_2
AAA
HTH_Tnp_ISL3
HTH_psq
HTH_23
HTH_11
HTH_30
HTH_24
RWP-RK
HTH_1
AAA_16
NACHT
HTH_50
DUF815
Motif
Other DBs
NCBI-ProteinID:
AKH64288
UniProt:
A0A0F7LQP8
LinkDB
All DBs
Position
3283338..3285023
Genome browser
AA seq
561 aa
AA seq
DB search
MAETSSAGRDNRDKPIIWTVSISRLFDLFRDITPEFDHQANITPIQLGFENAVQHIRKRL
TIERCDAVICAGSNGAYLKSRLSVPVIIAEASGFDFMQALARARQISSRIGVIAYQNTLP
ALEEFQQRFNLRIEQRSYITEEDARAQINALKAIGIKVIVGAGLITDLAYEAELVGVFVY
SADSIRRAFHDALDIARMTKLNQISISAYPIQETLRTRHTLNDIRGNSAVMEHVRNTIML
YARSPATVLIQGESGTGKELVAQAIHHEYALRYGPVAGKHQRPFVAVNCGAIAESLLEAE
LFGYEEGAFTGSQRGGRAGLFEVAHRGTLFLDEIGEMPLPLQTRLLRVLEEKSVVRVGGH
RPIAVDVRIICATHCDLDTWVQERHFRTDLFYRLSVLRINIPALRERGNDIGTLALEYLR
RAFAALNLPVSQSRVQELSACQEALQTYHWPGNVRELRNLMERIALYLSAHTEHILTPEL
ILALSPERQPALKLIEKSTRPSLALQSSFVTPPSAHETLKRFSGNRHAAAEHLGISRTTL
WRRLKQEMAENEGTDVDEKVI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacatcatcagcagggcgtgataacagagacaaaccgatcatttggacggta
tccatttcccgcctttttgatctattccgtgacatcacgccggagttcgatcatcaggcg
aatatcacgcctatccaacttggctttgaaaatgcggttcagcatattcgtaaacggctg
acaatcgagcgttgtgatgcagtgatctgtgccggctctaatggtgcctatctgaaaagc
cgtttatcagtgcctgttatcattgcagaggccagtggatttgattttatgcaggcattg
gcccgtgcacgacaaatcagttcccgcattggtgttatcgcctatcagaatacattgcct
gcactggaagaatttcagcaacggttcaacttacgtattgagcagcgtagctacatcacg
gaagaagatgctcgggctcagatcaatgcattaaaagccatcggtattaaagtcattgtt
ggtgctgggttgattaccgatctcgcctatgaggctgaacttgtcggcgtctttgtctat
tctgcggattctattcgccgggcattccatgatgcactggatatcgccagaatgaccaag
ctcaaccaaatttcaatttctgcctatccaatacaggaaaccttgcgcacccgccacacc
ctcaatgatatccggggaaattcagccgtgatggagcacgtgcgcaacaccatcatgtta
tatgcccgctcacctgccacggttctgatacagggggaaagcggtacagggaaagagctg
gtggcacaagccattcaccatgaatatgctctccggtatggtccggttgcaggtaaacat
cagcgcccgtttgtcgccgttaactgtggtgccattgctgaatccctgctggaagctgaa
ttgtttggttatgaggaaggggctttcaccggctcacagcgtggaggacgggcaggtctt
tttgaagttgcccatcggggcacactatttctggatgaaattggtgaaatgccactgcct
cttcagacgcggttattgagagtactggaagaaaaatctgtcgtcagagtgggaggacat
cgccccattgccgttgatgttcggatcatttgcgccacacattgcgatttggatacctgg
gttcaggaaaggcattttcggaccgatctgttctatcgcctgagtgtattgcggatcaat
attcccgctctcagagaaaggggcaacgatattggtacattggcgctggaatatctgcga
cgggcgtttgccgcattgaatttgccggtatcgcagtcaagagtacaagagctttctgct
tgtcaggaggcattgcaaacttatcattggcccggtaatgtccgggaactgcgtaatctc
atggagcgaatcgcgttatacctcagcgcccatactgagcatatattgacacctgaattg
atattggctctttcaccggagcgccaacctgcactcaagctgatagaaaaaagtacaagg
ccctctctggcgctgcaatcttcatttgttaccccaccttcagctcatgaaaccctgaaa
cgattttccggcaatcgccatgcggctgcggaacatctggggatcagccgtactacgttg
tggcgacgattgaaacaggaaatggcagagaatgaaggaacggatgttgacgaaaaagtg
atttaa
DBGET
integrated database retrieval system
