Photorhabdus thracensis: VY86_16935
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Entry
VY86_16935 CDS
T03944
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptt03400
]
VY86_16935
DNA repair and recombination proteins [BR:
ptt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VY86_16935
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
AAA_16
AAA_30
AAA_22
SLFN-g3_helicase
zf-tcix
LonC_helical
AAA
DZR
Zn_ribbon_RanBP
TniB
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AKH64769
UniProt:
A0A0F7LN90
LinkDB
All DBs
Position
complement(3921832..3923589)
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AA seq
585 aa
AA seq
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MTFTLRPYQQEAVDATVNHFRHHREPAVIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNYSKYCTYGLQADIFSAGLQQKQSAGKVVFGSVQSIARNLEHFNNQFSLLIIDECH
RISDDENSQYQQIIHHLRQNNPQLRILGLTATPYRMAIGWIYQYHYHGMIRGDENSFFRD
CIYELPLRYMIKHSFLIPPQRLDMPVMQYDFSQVRSSQQGIFNETDLNREIKRQKRVTPH
IIRQIIEYSADRKGVMLFAATVEHAKEIFQLLPSGQAALVSADTSITDRDLFIEAFKAQQ
LRYMVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLFPGKKDCLILDYAGNP
HDLYTPEVGNSRPDKQSQPVQVFCPICHFANIFWGKCTSDGEIIEHFGRRCQGWENDQHG
KRRQCDFRFRFKLCPHCGVENDIAARRCHRCQEVLVDPDDMLKAALKLKDALVLRCGGMQ
LIPGTDSKGEWLKITYYDEDGTDASERFRLTTPAQRRLFEYQFLRQHQRAPAVPFNWKTA
SDIVHQQPLLRHPDFVVARKKGQFWQIREKIFDYQGRFRRADELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgactttcactttacgtccctatcagcaagaagccgtggacgccacagtcaatcatttc
cggcaccatcgtgagcccgcagtcattgtgttaccaaccggagcaggtaaaagcctagtt
attgctgaactggcaaaattggctcgagggagagtcttagtattggcgcatgtaaaggaa
ttagttgcacagaattacagtaaatattgcacatacggtttacaagcagatattttctcc
gcgggattgcagcagaagcaaagtgcaggaaaagtggtttttggcagcgtgcaatctatc
gcccgtaatcttgagcattttaataatcaattctctttgctgataattgatgagtgccat
cgtatcagtgatgatgaaaacagccagtaccagcaaattattcatcaccttagacaaaat
aacccacaactccgtattcttggtttaacagcaacaccctatagaatggctatcggctgg
atatatcaatatcactatcacggtatgatccgtggtgatgaaaatagttttttccgtgat
tgcatatatgaattgccattgcgttatatgattaagcacagtttcctgatccctccgcag
cgactggatatgccagttatgcaatatgatttcagccaggtccgctccagtcagcaaggt
attttcaatgaaacggatttgaaccgtgaaatcaaacgacaaaaacgcgtcacacctcat
attatcaggcagatcattgaatattcggctgaccgtaaaggagttatgctttttgctgca
acagtcgaacatgccaaagagatctttcaattacttccttccggccaggccgcattagtc
agtgccgatacatcaatcaccgatcgtgacttgtttatcgaagcctttaaagctcaacaa
ttgcgctacatggttaacgttgccgtattaactaccggatttgacgcgcctcatgtcgac
ctaatagccatcctgcgccctaccgaatccgtcagcttatatcagcagattattggccgt
ggtttaagattatttccgggtaaaaaagattgccttattctcgactacgcaggaaatcct
cacgacctttacacaccggaagttggcaacagtcggccagataagcagagccaaccggtt
caggtattctgccctatctgtcactttgccaatatattttggggcaaatgtacctccgac
ggtgaaattatcgaacattttggacgccgctgtcagggctgggaaaatgatcaacacggc
aaacgtcgtcaatgcgatttccgctttcgttttaaactctgtccccattgcggtgtagaa
aatgacattgcagcacggcgttgtcaccgttgccaggaggtgctggtcgatcctgatgat
atgctgaaagcggcattaaaactcaaagatgccctggtactgcgttgcggtggtatgcaa
ctcatccctggaactgacagtaaaggtgaatggttgaaaatcacctattacgatgaagat
ggcaccgatgcctctgaacgcttccggcttacaaccccggcccaacgacggctctttgaa
taccagtttctccgtcagcatcaacgtgccccggcggtaccttttaactggaaaacggct
tcagacatcgttcatcagcaacctttgttacgtcatccagattttgtcgtcgcccgtaaa
aaaggtcagttctggcagattcgtgaaaagatctttgattaccaaggacgctttcgtcga
gcagatgaattgtattaa
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