Photorhabdus thracensis: VY86_16990
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Entry
VY86_16990 CDS
T03944
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VY86_16990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptt03400
]
VY86_16990
Enzymes [BR:
ptt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VY86_16990
DNA repair and recombination proteins [BR:
ptt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VY86_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
HTH_51
Motif
Other DBs
NCBI-ProteinID:
AKH64778
UniProt:
A0A0F7LS61
LinkDB
All DBs
Position
complement(3933350..3934192)
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AA seq
280 aa
AA seq
DB search
MKFIGAHVSAAGGVDQAVIRAHELKATAFALFTKNQRQWNAPPLATDIIDKFKENCERYG
YGSQQILPHDSYLINLGHPDTEALEKSRLAFVDEMQRCEQLGIDLLNFHPGSHLNKIDVD
KCLTRIAESINIALNKTQGVTAVIENTAGQGTNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTDDVCQKTFQEFEKIVGFQYLCGMHLNDAKSEFASRVDRHHSLGEGNIG
KTPFSYIMQDARFNGIPLILETIKPDIWHQEIAWLKSQQN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattggagcacatgtcagcgctgccggcggcgtcgatcaggcagttatccgg
gcacacgaattaaaagccactgcttttgccctgttcaccaaaaaccagcgccagtggaac
gctccacctttagccactgatattatcgataaatttaaagaaaattgtgagcgctatgga
tacggtagccagcaaattctccctcatgacagttatctgattaatcttggtcacccagac
accgaagcactggagaaatccaggctggcttttgttgatgaaatgcaacgttgtgaacaa
ctgggtatcgatttattgaatttccatcctggcagtcatctcaataagatagatgtggat
aaatgcctgacacgaattgcagaatctatcaacatcgctctcaataaaacccagggagtc
actgctgttattgaaaatacggcaggtcagggcacaaatctggggttcaaatttgaacat
ctggcagcaattattgacggagttgaagataaaagcagagttggcgtctgtattgatacc
tgtcacgcctttgccgcgggttatgatttgcgtaccgatgacgtttgccagaaaactttt
caagagtttgaaaaaattgttggctttcagtatctgtgcggaatgcatttaaatgatgcc
aaaagtgaatttgccagccgtgttgaccggcatcatagccttggggaaggaaatattggc
aaaacacctttcagttatattatgcaagatgcccgttttaatggaattccgctaatcctt
gaaacaattaagccagatatttggcaccaagaaattgcctggctgaaatcacaacaaaat
taa
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