Photorhabdus thracensis: VY86_20285
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Entry
VY86_20285 CDS
T03944
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt00061
Fatty acid biosynthesis
ptt00071
Fatty acid degradation
ptt01100
Metabolic pathways
ptt01212
Fatty acid metabolism
ptt02024
Quorum sensing
ptt04146
Peroxisome
Module
ptt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VY86_20285
00071 Fatty acid degradation
VY86_20285
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VY86_20285
09145 Cellular community - prokaryotes
02024 Quorum sensing
VY86_20285
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptt01004
]
VY86_20285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptt04147
]
VY86_20285
Enzymes [BR:
ptt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VY86_20285
Lipid biosynthesis proteins [BR:
ptt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VY86_20285
Exosome [BR:
ptt04147
]
Exosomal proteins
Exosomal proteins of breast milk
VY86_20285
Exosomal proteins of breast cancer cells
VY86_20285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Myosin_VII_N
Motif
Other DBs
NCBI-ProteinID:
AKH65344
UniProt:
A0A0F7LQ37
LinkDB
All DBs
Position
complement(4651352..4653040)
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AA seq
562 aa
AA seq
DB search
MEKVWLKHYPADVPAEIDPDRYASLVEMFENAVAHYADQPAYINMGEVMTFRKLEERSRA
FAAYLQNGLGLSKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPMYTPRELEHQLNDS
GTSAIVIVSNFAHTLEKIVFNTEVKHVILTRLGDQLSRPKGTLVDFAVKYIKRLVPKYNL
PDAISFRSAIHKGYRMQYVKPDINGADLAFLQYTGGTTGVAKGAMLTHRNILANLEQSKA
VYSPLLHSGQELIVTALPLYHIFALLVNCLLLIYLGGCNLLITNPRDIVGTAKELSRYPF
TSVTGVNTLFNAWLNNEEFRKLDFSSLRLVVGGGMPVQKAVAERWVEVTGRPLLEGYGLT
ECSPLVSCNPYNVKHYTGSIGFPVSSTEIKLVDDDGNEVPIGQQGELWVRGPQVMVGYWN
RHDATEEVLKDGWVATGDIANVNEQGFIHIVDRKKDMILVSGFNVYPNEVEDVVSAHPKV
LESAAIGVSSESSGETVKVFVVRRDPSLTEDELKTHCRRYLTGYKVPKIIEFRDELPKSN
VGKILRRELRDEEEKVRNAAIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggagaaagtctggctaaaacattatccggcggatgttcctgcggaaattgacccggat
cgttatgcatcattggttgagatgtttgaaaatgctgtagcgcactatgcagatcaacct
gcgtacatcaacatgggtgaggttatgaccttccgtaagctggaagagcgtagtcgggca
tttgctgcttatttgcaaaatggtttgggattaagcaaaggggatcgtgttgcactgatg
atgccaaacttgttgcaatatcctgttgcactgtttggcgttctgcgtgcaggtatggtt
gtcgtaaatgtaaacccgatgtatacgccacgcgaacttgaacatcagcttaatgacagc
ggcacttcagctattgtgattgtgtccaactttgctcatacactagaaaagatcgttttt
aataccgaagttaagcatgttattttgacgcgtttgggcgatcagctatcccgtcctaaa
ggtacgttggttgattttgctgtgaaatatatcaaacgactggtaccgaagtataatctg
cctgatgccatctcattccgtagtgcgatacacaaaggctatcgcatgcaatatgtaaaa
ccggatattaacggcgctgatttggcctttctgcaatatactggcggcacgactggcgta
gctaagggtgctatgttgacgcaccgtaatattctggcaaatcttgaacagtcaaaagcg
gtttattcaccgttactgcattctggtcaggaactgatagtcactgcgttgcctctctat
cacatatttgcattattggtaaactgtttgctgcttatttacttggggggatgcaatctt
ctgatcactaacccgcgtgatattgtcggtacagccaaagagttgagccgctacccgttc
acttctgtaactggggtgaatacgttgtttaacgcctggttgaataatgaagaatttagg
aagcttgatttttcttcgttacgtctcgttgttggtggtggtatgccagtacagaaggcg
gttgctgaaagatgggtagaagtaacaggaaggcccctgcttgaaggctatggcctgaca
gaatgttcaccattggtttcctgtaatccttataacgtgaaacattacactggcagtatt
ggttttccagtatcttcaactgaaattaaactcgtagatgatgacggtaatgaagtgccg
ataggtcagcaaggggaattgtgggtccgtggcccacaggttatggttggttactggaat
cgccatgatgcgacagaagaagtgttgaaagatggctgggtagcgacaggtgatattgct
aatgttaatgaacaaggttttattcatatcgtagaccgcaaaaaagatatgattttggtt
tctggttttaatgtgtatcctaatgaagttgaagatgttgtatcagctcacccgaaagtg
ctagagtcagcagcaattggcgtatcaagtgaaagttccggtgaaactgtcaaagtgttt
gtggttcgaagagatcctagtttgaccgaggatgaacttaaaacgcattgccggcgttat
ctgacagggtataaagtacctaagatcattgagttccgggatgaattacctaaatctaat
gtaggtaaaattcttcgcagagaactgcgcgatgaagaagaaaaggttaggaatgcagct
atagcctga
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