Pseudoalteromonas tunicata: PTUN_a0002
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Entry
PTUN_a0002 CDS
T05187
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ptu
Pseudoalteromonas tunicata
Pathway
ptu03030
DNA replication
ptu03430
Mismatch repair
ptu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTUN_a0002 (dnaN)
03430 Mismatch repair
PTUN_a0002 (dnaN)
03440 Homologous recombination
PTUN_a0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptu03032
]
PTUN_a0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a0002 (dnaN)
Enzymes [BR:
ptu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTUN_a0002 (dnaN)
DNA replication proteins [BR:
ptu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTUN_a0002 (dnaN)
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTUN_a0002 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta_3
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
ATC92856
LinkDB
All DBs
Position
I:1560..2666
Genome browser
AA seq
368 aa
AA seq
DB search
MMQITIPRDQFLKPLIQVSGAIERKHTLPILSNVLLEIADGKLMMTGTDLEIELVACVTL
SHFVEDSKLTLPAKKLLDICKSLPDGSEITLSAQDSQVLLTSGKSRFSLASLPALDFPNL
EQWDGEVDFQITRNELRKLLESTHFSMANQDVRYYLNGMSFEVDNSEIKTVATDGHRLAL
SQKKLDYSLNTQRQLIIPRKGVQEIMRLMVSDDNLVTIQFGANHFRIIDQEFTFTSKLVD
GRFPDYRRVLPRGGDKVVTANREWLRSAFSRVSILSNEKFRGVRLNFSAGELKITANNPE
QEQAEEIVEVVYSGPDLEIGFNVSYVLDVLNTLKTEDVSFTLSDSNSSALVEGTGDDEAM
YVVMPMRL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaataacaattccaagagaccaatttcttaagccattgatccaagtatcaggc
gctattgagcgcaaacatacattgcctattttatctaatgtattgctcgaaatagcagat
ggtaaattaatgatgaccggaactgatttagaaattgaattagttgcctgtgttacgtta
agtcattttgttgaagacagtaagctgactttaccagctaaaaaattactcgatatttgt
aagagtttacccgacggtagtgaaattacactctcagcacaagattcccaagttttgtta
acttcgggtaagagcagattttctctagcgtcattacctgcgctcgattttcctaattta
gagcaatgggatggtgaagtagattttcaaataacacgtaatgagttacgtaagttattg
gaaagtacacacttctctatggctaaccaagatgttcgttactatttaaatggtatgtct
tttgaagtagataattcagagattaaaacagttgctactgatggacaccgtttagcttta
tcgcaaaagaaattagattactcactaaacacccaacgtcaattgatcatacctcgtaaa
ggtgtgcaagaaattatgcgcttaatggtgagtgatgataatttagtgaccattcaattt
ggcgcaaatcattttagaatcattgatcaagaattcactttcaccagcaaattagttgat
ggccgttttcctgattatcgccgtgtacttcctcgtggtggtgataaagtggttacagca
aatcgagagtggttacgtagtgcattttctcgcgtatcgattttatcaaatgaaaagttt
agaggcgttcgtttaaacttctctgctggtgaactcaaaataacggctaataatcctgaa
caagaacaagccgaagaaatagtagaagttgtttatagcggtcctgatttagaaattggt
tttaatgtttcttatgtacttgatgtacttaatacattaaaaacggaagatgttagtttt
acactatcagattcaaatagcagtgcattggttgaaggcactggtgatgatgaagctatg
tatgttgttatgcctatgcgtttatag
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