Pseudoalteromonas tunicata: PTUN_a0080
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Entry
PTUN_a0080 CDS
T05187
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptu
Pseudoalteromonas tunicata
Pathway
ptu00300
Lysine biosynthesis
ptu00470
D-Amino acid metabolism
ptu01100
Metabolic pathways
ptu01110
Biosynthesis of secondary metabolites
ptu01120
Microbial metabolism in diverse environments
ptu01230
Biosynthesis of amino acids
Module
ptu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PTUN_a0080 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PTUN_a0080 (lysA)
Enzymes [BR:
ptu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PTUN_a0080 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATC92925
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All DBs
Position
I:complement(87231..88481)
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AA seq
416 aa
AA seq
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MDHFNYRDNQLFAEGVSVQDIATQFGTPCYVYSRATLERHYHAFTDAAAGQHHLVCYAVK
ANSNLAVLNVLARLGSGFDIVSQGELARVVAAGGDPRKVVFSGVAKTAHEIRYALELGIK
CFNVESEAELERISDVATELGQTAPISIRVNPDIDAKTHPYISTGLKENKFGIEIHRAVS
VYQHAATLPGISIEGIDFHIGSQLTEVEPFLAALDKVLAIIKQLKTLNIHIKHLDVGGGL
GVAYLAEEPPHPSSYVSQLVERLSEFSDLELVFEPGRAIAANAGILITQVEFLKQNQGKN
FAIVDAGMNDLLRPSLYQAWQNIIAVSPRSGTPSSYDIVGPVCETGDFLGKDRELSLQQG
DLLAVRSAGAYGFSMSSNYNSRPRVAEIMVDGATAHEIRKRETIADLYQGENKLPN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttaattaccgcgacaatcaactgtttgccgaaggggtcagcgtacaagac
attgcaacgcaatttggtaccccttgttacgtttattcgcgcgcgactttagagcgtcat
tatcatgcgtttaccgatgcagcagcagggcaacaccatttggtatgttatgccgtaaaa
gcgaattctaacttagcggtattaaatgtattggcacgcttaggctctgggtttgatatt
gtatcgcaaggagagctcgctcgtgttgttgcagccggtggcgaccctcgtaaagtggta
ttttctggtgttgctaaaaccgcccatgaaattcgctatgcactagagcttggcattaaa
tgctttaatgtagaatctgaagccgaacttgaacgcatctctgatgttgctactgagctt
ggccaaacagcaccaatttcaattcgtgttaatcctgatatcgacgctaaaactcaccca
tatatttcaactgggctcaaagaaaacaaatttgggattgagatccatcgagcagtaagc
gtttaccaacatgcagctactttgcctggtatcagcattgaaggcattgattttcatatc
ggttcgcaattaacggaagttgagcctttcttagcagccttagataaagtgctcgccata
atcaagcagttaaaaacccttaatattcacattaaacatttagatgtaggtggcggttta
ggcgttgcatacttagccgaagagccaccacacccaagcagttatgtgagccagctggtt
gagcgcttaagcgagttttcggaccttgaattggtctttgaacctggccgtgcgattgca
gctaatgcaggtattttaatcactcaagtggagtttttaaaacaaaaccaaggtaaaaat
tttgccattgttgatgctggaatgaatgacttattacgcccatctctttatcaagcgtgg
caaaatattattgctgtttctcctcgctcaggcacaccatcatcttatgacattgttggc
ccagtgtgcgaaacgggtgactttttaggaaaagatcgcgaacttagcctgcagcaaggt
gatttattagcggtacgtagcgcaggcgcatatggctttagcatgagttcgaattataat
tcacggccacgagtggctgaaattatggtagatggtgccacggcacatgagatcagaaag
cgcgaaaccatcgcagatttatatcaaggagaaaacaaactaccaaattaa
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