Pseudoalteromonas tunicata: PTUN_a0222
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Entry
PTUN_a0222 CDS
T05187
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptu03000
]
PTUN_a0222
Transcription factors [BR:
ptu03000
]
Prokaryotic type
Helix-turn-helix
Other families
PTUN_a0222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
AAA_5
PAS_4
AAA
HTH_8
Mg_chelatase
AAA_2
bpMoxR
MCM
DUF6732
PAS_3
PAS_7
AAA_22
TIP49
AAA_19
PAS_8
AAA_7
AAA_30
AAA_16
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ATC93047
LinkDB
All DBs
Position
I:complement(216901..218325)
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AA seq
474 aa
AA seq
DB search
MNDLKDLLANSDLLLNAVAEGIYGFDLEGNAVFINPAAERMTGWQNNELLGKKIHQYHHH
SHADGRCYPADECHIYATVKDGKTRHVDNEVFWRKDGSRFDVEYTSTAVYHQGEIVGAVA
LFRDISQQKQTDLDLRNALSEIRQLSEKLLAENVYLQSELSESWAGSGLVGQSAIYQSML
SQIELVSKTDSTVLILGENGTGKELVARNIHQLSQRKNAPLVKVNCAAFSENLLESELFG
HEKGSFTGANERRKGRFELADKGTLFLDEIGELSLAAQSKLLRVLQEQEFERVGGNQTIK
VNIRIIAATNRDLRAMVEKGTFRMDLFYRLNVFPIAVPALRERLEDIPLLCINILGHLNK
KLGKQIKSINQQSLAALMKYDWPGNIRELQNILEREVILSHSNTLKLQQKLVPNQVTQSH
SLASLAEAEKDHILQVLKHCHWVIGGEQGAAKILALPASTLRSRMQKLGIKRQR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttaaaagacttattagcgaattcagacttactgctcaatgctgtagctgaa
ggaatttacggctttgaccttgaaggtaatgcagtttttattaatcctgcggccgagcgg
atgactggctggcaaaacaatgagttacttggtaaaaaaatccatcagtaccatcatcat
agccatgctgatggtcgctgttatccagcggacgagtgtcatatttatgcaaccgtaaaa
gacggtaaaacaaggcatgtcgataacgaagttttttggcgtaaagatggcagccgattt
gatgttgaatacacatcaacagcggtttatcaccaaggtgaaatagttggtgctgtggca
ttatttcgagatattagccagcaaaaacaaactgatttagatctgcgtaacgcactgagt
gaaatccggcagttaagtgagaaactactagctgaaaacgtctatttacaaagtgagtta
tctgaaagctgggctggttctggcttagtgggacaaagcgcaatttatcagtcgatgctc
agccaaatcgaattagttagtaaaaccgacagtactgtgctcattttaggtgaaaatggc
acaggtaaagagctggttgcacgaaatattcatcaactaagtcagcgcaaaaatgcccct
ttagtcaaagtaaactgcgccgcttttagtgagaacttactcgagtctgagctctttggc
cacgaaaaaggctcatttaccggagctaacgagcgccgcaaaggtcgctttgaacttgct
gataaaggcaccctatttttagatgaaattggtgagttatcacttgcagcgcaaagtaag
ctgcttcgggtattacaagaacaagagtttgagcgtgtcggtggaaatcaaaccatcaaa
gtcaatattcgaattattgcagcaactaatcgtgatttacgtgcaatggttgaaaaaggt
acttttaggatggacttattctatcgcttaaatgtatttcctattgcggtgccagcctta
cgcgaacgattagaagacattccattgttgtgcatcaatattttagggcatttgaataaa
aagctcggtaaacaaataaaaagcattaaccaacaaagtttagcggctctaatgaaatat
gattggcctggaaatatcagagagctccaaaatattcttgagcgtgaagtcattttatcg
cattccaacaccttaaaattgcaacaaaaattggttcctaatcaagtaactcagagtcat
tctttagccagcctcgctgaggcagaaaaagaccacattctgcaagtattaaaacattgc
cactgggtgattggtggagagcaaggagcagctaaaattttagccttaccggccagtacc
ttacgctctcgaatgcaaaagttaggcataaaacgccaacgctaa
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