Pseudoalteromonas tunicata: PTUN_a1307
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Entry
PTUN_a1307 CDS
T05187
Symbol
fimV
Name
(GenBank) pilus assembly protein FimV
Organism
ptu
Pseudoalteromonas tunicata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
PKK
Motif
Other DBs
NCBI-ProteinID:
ATC93952
LinkDB
All DBs
Position
I:1191433..1195518
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AA seq
1361 aa
AA seq
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MRGLASILLLMSVLVVTPNLASGEGTRLKGPKGVDYGEQGRSFGPVKESDTLWRIAVKIR
PDNSVSIYQVMQALYEKNPDSFLDKNINHIRDGAYLKIPSLAEIRSIEPELARQKSDKDD
AMWEKKKNGTLDSSTINLVEKKMTQARQSDVEDAKQEIKKELDELKQDQSVRLVDLQKKF
KESVDNVETILAENNKLKSQLENISSELDGVKEQLGNDSLIQQQLREMLSMQNELLAQQK
AEMLEKEAGFSWSKFISDPLTWIFLGSVPAIMMLVGGYLYIRNRKAGAQEPENIFDTPKP
AVAPAPPPPPFETDSPDLMSIDDSLADDTLDDLLNDSIQLDDVHDNDDMLPEPDDILYEE
DEPELDLDDFEGDSLLNQDELDGLLSDDLIFDDGSDELDDLVPDLESDAIDPNNILNEDD
IDALLQQDFDSDDDLLPETDIEIDIPEELEPDDNVVDDVDIDGIMDELSASNTPVKDDDI
DSLLEGNQQDDSDDLTSDLDDIDDLLNSVQADEALDNADIDDLLDSQPMTEQAIDDLLAS
DDDTLLDNDLPTSDADELGGDFDDIDSLLDAVNDTEKNKPSSVPSVDLSNDDLDDIDSIL
DAIDEAPSSEPDIEINIDGDNETNDLTDDLDNLLDTANDELDDILDSTDEASSVSSDIEI
NIDSNNEVNGITDDFEDLDSLLDTTNDALVDDLDDLDGLLDDNNDLIADPELTDIVDDLD
DIDNLLSATDTPLTQDLTELPQELDELIAQNETTPIEQEDELSDLDELDDLLDSLDKPLA
DDIDAEDDSMSLDSLVSDQDDESDFVQNAELAPDDDLLDTLDELDADEQIEGQTELETLE
ASAVEEAPADDDSDSLDDLSDIDNLLDSLDDPLLDDVQTSDELDTPNDLSIEDENELVSD
LDSDSLDELEQADSSDDMRDLLDSLDDPNPQEVSDNDIETEELDATDLETQKPSSEQESN
PQLDDLEPYHENLANFDSDESELDGEIELGDDPLAELDEADVQEPEVSEELVEPEDDELL
IEEDLIDEGLIDDELITDEIDLADDTEEGDELTADLEQLRADTPSIELDEYPELELDEAL
AELNMADFGHSTVQPSQTEKELQESLSLGSSDIDADLEISEDDFIEDFELDGLDDEFGEL
AQSGIGKTIADLEADLQSIEQDIHSEDDTSELDSKFDSLLEESDEGFMLDDLDADDELDE
ALLDPLEHTDFDSLLSELEGDDEIDSNDLQEFELDFDNLLAEESLSAEPLDITEPDELDE
EGDYLDIEQLLEESDDQVPEDEPYDKVKIDLGLSEFDQLLASEPGMDVDSESGGFSAKLD
LARAYLEIEDYDNALKTVQDVIDNGPADVQQEAGRLLNQLK
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtttagcctcaattttacttttaatgtcagtgctggtggtaacaccaaatttg
gctagtggtgaaggcactcgattaaaaggccccaaaggtgttgactatggtgaacaaggt
cgctcatttggccctgtaaaagaaagtgatactttgtggcgtattgcagtgaaaattcgt
cctgataattcagtgtcgatctatcaagttatgcaggccttatacgaaaaaaatccagat
tcttttcttgataaaaacattaatcacattcgtgatggtgcttatttaaaaatcccatct
ttggctgaaattcgcagcattgaacctgaacttgcccgtcaaaaatcggataaagacgat
gccatgtgggaaaaaaagaaaaatggcacgttagatagctcaacaattaacttggttgag
aaaaaaatgacacaggcgcgtcagtctgatgttgaagatgcgaagcaagaaataaaaaaa
gaactagatgaactaaaacaagatcaaagcgttcgccttgttgatttacaaaagaaattt
aaagaatctgtcgataacgttgaaaccattttagcggaaaataataagttaaaatcgcag
cttgaaaatatttcttctgagcttgacggcgtgaaagaacaactgggtaacgatagttta
attcagcagcagttgcgtgaaatgctgtcgatgcaaaatgagttattagcccagcaaaaa
gcagagatgttagaaaaagaagctggatttagttggtcaaaatttatttcagatccgctc
acttggattttcttgggttcagtccctgcgattatgatgttagtgggtgggtatttatat
attcgcaatcgcaaagctggtgcgcaagagcctgaaaatatttttgatacaccaaaacca
gccgtagcgcctgcgccaccacctccgccatttgaaacagattcacctgatttgatgagt
atcgatgacagccttgcagatgatacgcttgatgatctacttaatgactctattcagctt
gatgatgtacacgataatgacgacatgctgccagagcctgatgatatcttgtatgaagag
gatgaacctgaattagatttagatgactttgaaggtgactcactgctaaatcaagatgag
ttagatggtttacttagcgacgatttaatttttgatgatggttcggatgaactcgatgat
ttagtgcctgatctagaatcagatgccatcgatccaaacaatattttaaacgaagatgat
atcgatgcattactgcaacaagattttgacagtgatgatgatttattacctgaaaccgat
atagaaatagatatacctgaagagttagagcctgatgataatgtggttgatgatgttgat
attgacggcattatggatgaactcagcgcatcaaatacgccagtaaaagatgatgatatt
gattcattacttgaaggtaatcaacaagatgacagtgatgacttaaccagtgacttagat
gacattgacgatttgttaaattcagttcaagcggatgaggcgcttgataatgctgatatt
gacgacttattagacagtcagccgatgacagagcaagcaattgatgatttgcttgcatca
gatgatgatacgttacttgataatgacctacccactagtgatgcagatgagctcggtggc
gattttgatgacattgatagtttacttgatgctgtaaatgatactgaaaaaaataagcca
agctcagtaccatcggtagatttaagtaatgatgacttagacgatattgatagtatttta
gatgctattgatgaagcaccaagttctgagcctgatattgaaatcaatattgatggcgat
aatgaaaccaatgacttaactgatgacctagataatttactcgatacagctaatgatgag
ttagatgatattttagattctaccgatgaggcgtctagtgtttcgtctgatattgaaatc
aatattgatagcaataatgaagtaaatggcataactgatgacttcgaggatttagatagc
ttacttgatacaactaatgatgcattagtcgatgacttagatgatcttgatggcttatta
gacgacaataacgatcttattgcagaccctgaactaaccgacatagtcgatgatttagat
gatatcgataatttactcagcgccactgatacgccattaactcaagacttaacagaacta
ccgcaagaactagatgaactgattgcacaaaatgaaacaactcctattgagcaagaggat
gagttaagtgatttagacgagcttgatgatttactcgattcattagataagcctctggct
gatgatattgacgctgaagatgactcgatgagtcttgatagtttagtttctgatcaggac
gatgagagcgattttgttcaaaacgctgagttagcgcctgacgatgatttactcgatacg
ttagatgagctcgatgctgatgagcaaattgagggtcaaacagagttagagactttagag
gcatctgcagttgaagaagcacctgcagatgatgactcagatagccttgatgatttaagt
gacatcgataatttactcgattcattagatgatcctctgttagatgacgttcaaactagc
gatgagctggatacaccaaatgatttatcgattgaagatgaaaatgagctggtatctgat
ttagattctgattcattagatgagttagaacaggctgatagctctgatgatatgagggat
ttactcgattcgttagatgaccctaaccctcaagaagtatcagataatgacattgaaaca
gaagagctagatgcaacagacttagagacgcaaaagccatcctcagaacaagagagtaat
cctcaacttgatgatcttgagccttatcatgagaatttagctaattttgactccgatgag
tctgagctggatggtgaaattgagcttggtgacgatccattggctgaattggacgaagct
gatgttcaagagcctgaggttagcgaagaacttgttgaacctgaagatgatgagctgtta
attgaagaagatcttatcgatgaaggtctgattgatgatgagctaatcactgatgagatt
gatttggctgacgatactgaagagggagacgagcttactgcggatcttgagcaattgcga
gctgatacaccgagtattgaattagatgaataccctgaacttgaattagacgaagcattg
gctgaattaaatatggccgactttggacactcgacagttcagccatcgcaaactgaaaaa
gagttacaagaatcactaagcttaggtagctcagatattgatgctgatttagaaatttct
gaagatgattttatcgaagattttgagcttgatggtttagatgatgaatttggtgaattg
gctcaaagtggaattgggaaaacaattgctgacttagaagctgacttacaaagcatagaa
caagacattcatagcgaagatgatactagtgagttagatagtaagtttgactcattatta
gaagagagcgatgaaggctttatgcttgatgatctcgatgctgatgatgagctagatgaa
gcgctacttgacccacttgagcacaccgattttgattctttattgagtgaattagaaggt
gacgatgagatagactctaacgacttacaagagtttgagttagattttgataatctactt
gccgaagagtcactgtcggcggaacctttagacatcactgagccagacgagttagatgaa
gaaggggattacttagatattgaacaattacttgaggaaagtgatgaccaagttcctgag
gatgaaccttatgataaagttaaaatcgatttagggttaagtgagtttgatcaactttta
gcaagtgaaccaggtatggacgttgacagcgaaagtggtggtttttcagcgaaacttgat
ttggcccgtgcttatttagaaattgaagattacgacaacgcacttaagacagtgcaggac
gtaattgataatggtcctgccgatgttcagcaagaggccgggcgtttactcaatcaactt
aaataa
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