Pseudoalteromonas tunicata: PTUN_a1710
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Entry
PTUN_a1710 CDS
T05187
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptu03032
]
PTUN_a1710 (topA)
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a1710 (topA)
Enzymes [BR:
ptu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PTUN_a1710 (topA)
DNA replication proteins [BR:
ptu03032
]
Prokaryotic type
DNA Topoisomerases
PTUN_a1710 (topA)
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PTUN_a1710 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ATC94305
LinkDB
All DBs
Position
I:1568008..1570653
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AA seq
881 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPTSGSGQNKKSSTGKTPAEVRKM
DPEEKAAYKQARDYNNLVARMGIDPAKGWQPHYEILPGKEKVVQELQKLAQDADQIYLAT
DLDREGEAIAWHLEQVIGGESSKYKRVVFNEITKNAIQQAFSTPGELNTDMVNAQQARRF
LDRVVGFMVSPLLWQKVARGLSAGRVQSVAVRVLVEREREIKAFIPEEYWDLHADVVAKQ
EQIRLAVVKYQQQAFKPVNKDQTMAAVAALENAQFTVVENEKKPSKSKPSAPFITSTMQQ
ASSNRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSVDAVTACREYVAEKFGQHYLPAE
PISYSSKGNAQEAHEAIRPSNVAFMSGDLDGVEADAKKLYELIWRQFVACQMVNAEYDLT
TITVEAADYQLKAKGRVLVFDGWTRVQPAIRKKNEEEQALPKVEVGDVLKLEQLDPLQHF
TKPPARFGEASLVKELEKRGIGRPSTYAAIISTIQDRGYARVENRRFFAEKMGEIVNDRL
VENFTELLDFDFTAKMEGRLDDIALGKLEWTDVLDTFYKDFSLQLEVAGKEELEGGMRQN
QMVETDITCPTCARNMGIRTASTGVFLGCTGYNLPPKERCTTTMNLTSGDEALAVDSEDA
ETESLRHMKRCPVCETAMDSYLIDEGRKLHVCGNNPGCNGYIVESGTFKIKGYDGPLIEC
DKCGSDMQLKSGRFGKYFGCTNDECKNTRKLLKSGEAAPPKEDPVHLPELVCEKSDAYFV
LRDGASGLFLAASTFPKSRETRAPKVAELKRFRDRISPKFYYLADAPLTDAQGNETIVRF
SRKAKEQYVMTEVDGKATGWTAHYLQGKWVVEEKKAASKKA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgttagtaattgttgagtcaccggctaaggctaaaacaattaataaatac
ttagggaaagattttgtagttaagtccagtgttggacatatccgcgatcttccaacttca
ggttcgggccagaataaaaaatcttcaacaggtaaaacaccagctgaagtgcgtaaaatg
gatcctgaagaaaaagccgcttataaacaagctcgtgattataataatctagttgcgaga
atgggtattgatccagctaaaggctggcaaccgcattatgaaatattacctggtaaagaa
aaggttgttcaagaattacaaaaactagcacaagacgctgaccaaatctatctcgcaacc
gacttagatagagaaggggaagctattgcatggcacctcgaacaagtgattggcggcgag
tcgagcaaatataaacgtgtcgtgtttaatgaaatcactaaaaatgcgattcaacaagca
ttctcaacacccggtgaattaaacactgatatggtgaatgctcagcaagcgaggcgcttc
ttagaccgtgttgtgggttttatggtttctccactactttggcaaaaagtagcgcgaggt
ttatctgcagggcgagtgcaatcggttgctgtgcgagttttagttgaacgtgagcgtgag
attaaagcatttatcccagaagaatattgggacttacacgcagatgttgttgctaaacaa
gaacaaattcgtttagctgttgttaaatatcaacaacaagcctttaagccagttaataaa
gatcaaacaatggccgctgttgctgcattagaaaatgcacaatttactgtggtcgaaaat
gagaaaaagccaagtaaaagtaaaccatcagctccttttattacttcaacaatgcaacaa
gcttcgagtaatcgcttaggttatggtgtaaagaaaaccatgatgttggcccagcgctta
tacgaagcgggttacataacttatatgcgtacggactcaaccaatttatctgttgatgca
gtgactgcttgtcgcgagtatgtggcagaaaagtttggccaacactatttaccagctgaa
cctatttcttacagttctaaagggaatgctcaagaggcccatgaagcaattcgtccttct
aatgtggcgtttatgtctggtgacttagatggtgttgaagctgacgctaaaaagctatat
gagcttatttggcgccaatttgttgcttgccaaatggttaatgcggaatatgacttaaca
accattactgtagaagcggcagactaccaattaaaagctaaaggccgagtattggtattt
gatggttggacacgtgtgcaacctgctattcgtaaaaagaatgaagaagaacaagcatta
cctaaagttgaagtgggcgatgtacttaaacttgaacagcttgatccattgcagcacttt
acaaaaccgccagcacgatttggtgaagcaagtttagttaaagagcttgaaaaacgaggc
attggtcgtccatcgacttatgctgctatcatttcaacgattcaagacaggggttatgcc
cgagtcgaaaatcgccgtttctttgccgagaaaatgggtgaaattgttaatgatcgttta
gtagaaaactttactgaattacttgattttgatttcacagccaaaatggaaggtcgttta
gacgatatcgctcttggtaaattggaatggaccgatgtacttgataccttttacaaagat
ttttctttacagctcgaagtggcgggtaaagaggagcttgaaggtggcatgcgtcaaaat
caaatggtagaaacagatataacttgcccgacttgtgctcgtaacatggggatcagaact
gcttctactggagtcttcttaggatgtacaggttataacctaccgccaaaagagcgttgt
actactacaatgaacttaactagcggtgacgaagccttagcggtcgattcagaagatgct
gaaacagaaagtctgcgtcatatgaagcgctgtccggtatgtgaaacagcgatggattct
tatttaattgatgaaggtcgcaaattacatgtttgtggtaataatcctggttgtaatggc
tatattgtagaatctggtacttttaaaataaaaggatatgatggcccacttatcgaatgt
gataaatgtggttctgatatgcagttaaaatcaggccgttttggtaaatattttggttgt
acgaatgatgagtgtaaaaacactcgtaagctacttaaaagtggcgaagctgcaccacct
aaagaagatccagttcatctacctgaacttgtttgcgaaaaatctgacgcttattttgtg
ctaagagatggcgcatcgggattatttttagcagcatcaacctttcctaaatctcgtgaa
actcgcgcaccaaaagtggcagagttaaagcgttttagggatcgtatctcacctaaattt
tattatttagctgatgcaccgctcactgatgcgcaaggaaatgaaaccattgttcgtttt
agtcgtaaggcaaaagagcaatatgtaatgactgaagttgatggtaaggcgactggttgg
actgcacattacttgcaaggtaagtgggtagtagaagagaaaaaagccgctagcaaaaaa
gcttaa
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