Pseudoalteromonas tunicata: PTUN_a1792
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Entry
PTUN_a1792 CDS
T05187
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ptu
Pseudoalteromonas tunicata
Pathway
ptu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PTUN_a1792 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a1792 (recB)
Enzymes [BR:
ptu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PTUN_a1792 (recB)
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PTUN_a1792 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
DUF1999
Terminase_6N
V_ATPase_I_N
Motif
Other DBs
NCBI-ProteinID:
ATC94374
LinkDB
All DBs
Position
I:1655811..1659362
Genome browser
AA seq
1183 aa
AA seq
DB search
MQGLNPITMPLKGVSLIEASAGTGKTYTITALYLRHLLGLQVAGQTGVPLTVEQILVVTF
TEAATAEIKDRVRKRIILARDALMGGDCDDAVVQAILSEVSETKMAFALLDAAAKSMDDA
AIFTIHGFCQRMLKQHAFESGVAFNLTFIMDQSELLTEALKDYWRTFVYGLTKERTAHVL
AYFPAPERLYKKVAALLSRSGAKIQPQINLDEVWQWQEQYLSLLARFKIDYLKSDFAAAI
LNSDLKKTKPAAKAPNLELLLAFCQSEQTVFEFGSDKKSFEIWAADNFLDPEMYKKGGKT
FSHPLCQVFTELSELQQKLTFGMPIAIAQQATKWVSAALSTKKQEQRLISPDDLLTQLHH
ALFSDGGDTLASQIAADFPVAMIDEFQDTDPIQYGIFSQIFNRESCAFTMIGDPKQAIYG
FRGADIFTYINAKHQVSTEQQYTLGKNWRSSTGIVNSVNALFNHHDNSFIFNQDIPFLAV
EAQGKTAEQALYLDGKAVTAFEFCVLEHDAPVTSKAYAMPRLAAHFSDKIATLLQQAQAG
RATIGSHAVQAADICVLVRDRNEASFIKEALSKQGIASVYLSRDGVLQSPLALHLLNFLT
ALHGQYDESAYRGVLAGPLFNLNYQQIYQLAENEQTWQQYLALFSELSDIWYKKGAMAML
ELLLMRNNLAGLWQAMGLPVERWLTDFRHLAEILQQKQLELEGSLRLVRWFAQNIIDTSK
ESAQLRLESDAKLVKIVTMHASKGLEYPLVFMPFAVGFREASEQIYHQDGELVYNLIKDD
ASQQLAEKERLAEDLRLLYVALTRPVHQCFIGMYNIAVGNSKSMTIQRTALGHLLFAGQT
LTSATDWHQLLNAFAAAHSADMAVSYFAETDSKISLSDELTVPNYERKLFTGKIERNWRL
TSFSALSYNQASEHITPGFEDESHELDWLGEEQSNELNQFSFPRGARAGSCLHAIFEEID
FQHPDTHPSDPSKNLGAVVEQQLQKYSIEPHWQLVAEQWIKRVLSTPLDADGLSLNKLGA
QQCLIEMEFYLPFERLDATGINQVLDSVASESVFKHNLKFETIQGMLKGFIDLIFEWQGK
YYVLDYKSNHLGELASDYQQSNMEEVMQSHHYHLQYLLYSVALHRLLKTRLADYDIEQHL
GGVYYLFLRGMGEGEGIYFKKIAKEIILQLDRMFEQATLEVTY
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggcttaatccaatcaccatgccgcttaagggcgtatcacttattgaagccagc
gcaggcaccggtaaaacttacacaattactgctttgtatttgcgccatttattgggttta
caagtagctggtcaaacaggtgtgccacttacggtagaacaaattttagtggtgactttt
accgaagcagcgacagctgaaatcaaagaccgcgtgcgtaaacgcattattcttgcccgt
gatgccttgatgggcggcgactgtgatgatgccgtggtacaagcaattttaagtgaagtc
agtgagactaaaatggcctttgccttgttagatgcggcggcaaaatccatggatgatgcg
gctatttttactattcatgggttttgccagcggatgctaaaacaacatgcgtttgaatcg
ggtgttgcatttaatctcacgtttattatggatcagtccgaattgctgactgaagcactt
aaagattattggcgtacgtttgtttatggcttaacaaaagagcgcactgcgcatgtactt
gcgtattttcccgcgcctgaacgtttatataaaaaagtggcggcgttgttatcacgtagt
ggcgctaagatacagccgcaaattaatcttgatgaggtctggcaatggcaagaacagtat
ttgtctttgttagcccgctttaaaatagactatttaaagtctgattttgcagcggctatc
ttaaattctgaccttaaaaaaaccaaaccagcggctaaagcgcctaatcttgagctgtta
ttggcattttgccaaagtgaacaaactgtatttgaatttggctcagataaaaaatcattt
gaaatttgggccgctgataactttttagaccctgagatgtataaaaagggcggtaaaacc
tttagccatcctttatgtcaggtgtttaccgagctcagtgagctgcaacaaaagctcact
tttggcatgcccatcgcaatcgctcaacaagcaactaagtgggtgagtgcggcattaagc
accaaaaaacaagagcagcgcctaatcagccccgatgatttattaacccaattacaccac
gccttatttagcgatgggggcgatactttggcaagtcaaattgcggcggattttccggtt
gcgatgattgacgaatttcaagataccgacccaattcaatacggtatttttagccaaata
tttaaccgagaaagctgcgcttttaccatgataggtgatccaaaacaggctatttatggc
tttcgcggcgcggatatttttacctatattaatgcaaaacatcaggtatcgaccgagcag
caatacaccttaggtaaaaattggcgctcaagcacaggcatagtcaatagcgttaatgcc
ttgtttaatcatcacgataatagctttatttttaatcaagacattccatttttagcggtt
gaagcacaaggtaaaactgcagaacaagcactgtatcttgacggtaaagcagtgactgcg
tttgagttttgtgtgcttgaacatgatgcgcctgtcaccagtaaagcttatgccatgcca
agattggccgcacattttagcgataaaatagccaccttgttgcaacaagcgcaagcaggg
cgtgccacgattggcagccatgctgttcaggcggcagatatttgtgtgctggtgcgagac
cgaaatgaagcgtcgtttattaaagaggcgttaagcaagcaggggattgccagtgtgtat
ttatcccgcgatggtgtcttacaaagcccactggctttgcatttattaaactttttaacc
gccttacatggtcaatatgatgagtcagcttatcgtggggttttagcgggccctttattt
aatttaaattatcaacaaatctaccaattggcagaaaatgaacaaacgtggcagcaatat
ttagccctttttagcgaattgagcgatatctggtacaaaaaaggcgccatggcgatgctt
gaattattgctgatgcgtaataatttggcgggtttatggcaagcaatggggctgccagtt
gaacgttggttaacggattttcgccatcttgctgaaattttgcagcaaaagcagttagaa
cttgaagggagtttacggttagtacgatggtttgcacaaaatattatcgataccagtaaa
gaaagtgcgcaacttaggcttgaaagtgacgctaaattagtaaaaattgttaccatgcat
gcatcaaaaggattggaatatcctttggtttttatgccatttgcggttggctttcgtgaa
gcatctgagcaaatttatcatcaagatggtgaacttgtttacaatcttattaaagacgat
gccagtcagcaacttgccgaaaaagagcgtttagccgaagacttacgcttattgtatgta
gccttaactcgcccagtgcatcagtgctttattggcatgtataacattgcggtgggcaat
agtaaaagcatgacaattcaacgtacagccttaggccatttgttgtttgctggccaaacc
ctcactagcgctaccgattggcatcagttattaaatgcctttgcggcagcacattcagcc
gatatggccgtgagctattttgctgagactgatagtaagatctctttgagtgatgagctc
acagtgcccaactatgagcgcaaactatttactggcaaaattgagcgtaactggcgttta
accagctttagcgcgcttagttataatcaagcatcagaacacattaccccaggttttgaa
gatgaaagccatgagctcgattggcttggcgaagagcaaagcaacgaactcaatcaattt
agttttccaagaggagcaagggcggggagttgcttacatgctatttttgaggagattgat
tttcagcatcctgatacgcacccaagcgatccgagtaaaaatcttggcgctgtggttgag
caacaacttcaaaaatattcaatcgaaccccattggcaactcgttgcagagcaatggata
aagcgcgtattaagtacgcccctcgatgctgatggcttgagtttaaataagcttggcgcc
caacaatgtttaatcgaaatggagttttatttaccttttgagcgtcttgatgccacaggt
attaatcaagtactcgatagtgtggcaagtgaaagtgtgtttaaacataacctgaaattt
gaaaccattcagggcatgttaaaaggttttatcgacttaatatttgagtggcaaggtaaa
tactatgtgcttgattataaatcgaatcatttaggtgagctggcgagcgattatcagcaa
agtaatatggaagaagtcatgcaatcgcatcattaccacttacagtatttgttatacagc
gttgcgttacatcgattattaaaaacccgcttggccgattacgatatcgagcagcattta
gggggtgtttactatttatttttgcgaggcatgggcgaaggcgaaggcatatattttaaa
aaaatagccaaagagatcattttgcaactcgaccgtatgtttgaacaagcaactttagag
gtgacctattaa
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integrated database retrieval system
