Pseudoalteromonas tunicata: PTUN_a2109
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Entry
PTUN_a2109 CDS
T05187
Name
(GenBank) putative spermidine/putrescine transport system substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ptu
Pseudoalteromonas tunicata
Pathway
ptu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PTUN_a2109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptu02000
]
PTUN_a2109
Transporters [BR:
ptu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PTUN_a2109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ATC94639
LinkDB
All DBs
Position
I:1968451..1969713
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AA seq
420 aa
AA seq
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MDPTRRKALKKIAISTLATTAAFKVPFVFSKQKVVLRILGTHVTLQEAIREQAMKDLGIE
LVFEAKGSAQVLQKASMSPQSFDLYEQWSNSINILWHSGAIQPIEKNRIKNWGEINSLTK
TGRITPDAKIGAGDAPYKLLHVQHDGSLGEDHTDQLSFLPYVHNVDSFGYNTNFIKKGVP
YESESWGWLLDPAYSGKVGIINAPTIGLFDLALAVQAQGLMQFNNIGAMTKSELNQLFKI
LLEFKQQNHFSGFWTSVPESVEFMKTERVHIESMFSPAVSALNGQNVTVNFAAPKEGYRG
WHGVMCLSSMAKGNVKDAAYDYMNWWLSGWPGAFIARQGYYISNPQRSKLFLSMDEWNYW
YQGRIATSDLTGTDGLISVKKGHMRTGGSYEKRLSHVAVWNTVMPTYEYSLQKWYEFLST
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
ttggaccctactcgtcgaaaagccttaaaaaaaatcgctatttctactcttgcgactact
gcagcttttaaagtcccgtttgtattttccaaacaaaaggttgttttacgcattttagga
acgcacgttaccttgcaagaagctattcgtgaacaagccatgaaagacttaggcattgaa
ttggtttttgaggcgaaaggtagcgcccaagtactgcaaaaagcgtctatgtctcctcaa
tcttttgatttgtatgaacaatggtcaaacagtatcaatatattgtggcacagtggtgca
atccaaccaattgaaaaaaatcgtattaaaaattggggtgagattaactcattaactaaa
acgggacgaataacgccagatgcgaagataggtgctggtgatgctccttataaactcctt
catgtacagcatgatggttctttaggtgaagatcatactgaccaactcagttttctacct
tatgtccataatgttgattcatttggctataatacgaattttattaaaaaaggtgtgcct
tacgaatcggaaagctggggttggttacttgaccccgcttacagtggaaaagtcggcatt
attaatgcgccaacgattggattatttgacttggctttagcagttcaagcacaagggcta
atgcagtttaataatattggagcgatgacaaaaagtgaattaaaccaactttttaaaata
ttactcgaattcaaacagcaaaatcacttcagtggtttttggacttcagtgccagaatct
gttgaatttatgaaaactgaacgagttcatattgaaagtatgttttcacctgcagtctcg
gctttaaatggtcaaaatgtcacggtaaatttcgcagctccgaaagaaggctaccgcggt
tggcatggtgttatgtgtttatcatcaatggctaaaggcaacgtaaaagatgccgcctac
gactatatgaattggtggttatcaggttggcccggtgcatttatcgcaagacagggctat
tatatttcaaatccacagcgatctaaattatttctatccatggacgaatggaactattgg
tatcaaggaagaattgccacttcagatctaacaggcactgatgggcttatatcagttaaa
aaaggacacatgagaacaggtggaagttatgaaaaaagactcagtcatgttgctgtatgg
aatacagttatgccaacgtatgaatatagcttgcaaaagtggtatgaattcctcagtacg
tag
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