Pseudoalteromonas tunicata: PTUN_a2121
Help
Entry
PTUN_a2121 CDS
T05187
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptu03032
]
PTUN_a2121 (ihfB)
03036 Chromosome and associated proteins [BR:
ptu03036
]
PTUN_a2121 (ihfB)
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a2121 (ihfB)
DNA replication proteins [BR:
ptu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PTUN_a2121 (ihfB)
Chromosome and associated proteins [BR:
ptu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PTUN_a2121 (ihfB)
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PTUN_a2121 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Cac1_C
CEP76_N
NGO1945_C
PqqD
HU-CCDC81_euk_1
HU-CCDC81_euk_2
YtxC
XLF
Motif
Other DBs
NCBI-ProteinID:
ATC94649
LinkDB
All DBs
Position
I:complement(1980290..1980580)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIEQLAEQHPQLSAKDVENSVKEILEQMADSLSESQRIEIRGFGSFSLHFRAPRV
GRNPKTGDTVELLGKYVPHFKPGKELRDRVNESLNN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaacttatagaacaattagctgaacaacatccacaactttctgccaaa
gacgtagaaaactcagttaaagaaattcttgagcaaatggcggattcattatctgaatct
caaagaatcgaaattcgtggttttggtagtttttctcttcattttcgcgcaccacgagta
ggccgcaatccaaaaacgggtgatacagttgagttacttggaaagtatgtgcctcatttt
aaacctggtaaagagttaagagaccgtgtaaacgaaagtttgaacaactaa
DBGET
integrated database retrieval system
