Pseudoalteromonas tunicata: PTUN_a2812
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Entry
PTUN_a2812 CDS
T05187
Name
(GenBank) ATP-dependent helicase IRC3
KO
K19789
DNA repair protein RadD
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a2812
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PTUN_a2812
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
NAD_binding_10
AAA
Zn_ribbon_3
AAA_22
TniB
AAA_16
DUF7577
SLFN-g3_helicase
zf-tcix
AAA_30
DZR
DUF6282
P-loop_SecA
T1R_D3-like
Zn_ribbon_RanBP
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ATC95234
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All DBs
Position
I:complement(2575974..2577641)
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AA seq
555 aa
AA seq
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MIVLPTGAGKSLVIAELARLAKRKILVLAHVKELVEQNCEKYQSYGLKASIFSAGLKQKS
LKEQVTFGSVQSLGANLAQLNEPYSLLIIDECHRVDNTETTQYNKVISQLKSLNPDLKVL
GLTATPYRLGMGWIYHHHYHGFVRGSSESPFVKCIYELPLRYMIKNKFLTPPEVLDAAIC
HYDFAALATDSFGRVSGNDLNQMLKENQRATKAIIEQVIELSNERQGVMIFAATVEHAKE
ILSYLAEHNAVLVTGETDNTTRDNIVRDFKARKIKYLVNVSVLTTGFDAPHVDFIAILRP
TESVSLYQQIVGRGLRLSPGKTDCLVIDYAGNGFDLFYPEVGAKKPSTDSEPVQVLCPGC
GFANTFWGKTDEQGKVIEHFGRRCQGLLLDDETAQSQQCDYRFRFKECDSCGAENDIAAR
VCHACQALLVDPDDKLRAALNLKDALVLRCSGMTIEPFGSEKVKITYFDEDGASCDEVFN
LAVKAACYIFNQQFGKRVALGKIPSTFANVAEVLAAKALLAHPDFVIARKAKYGWKIADK
IFDYQGVFRKAYQER
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtattgccgacaggggcgggaaagagcttagtgattgctgagcttgctcggtta
gcgaaacgaaaaattttggttcttgcacatgttaaagagttagttgagcaaaattgtgag
aaataccaaagctatggtttaaaagcgagtatattttcagcgggtttaaaacaaaaatcc
cttaaggaacaagttacttttggcagtgtacaatcgcttggagctaatttagcacaactt
aatgagccttattcattattgattattgatgagtgtcaccgagttgataataccgagacc
acacaatacaacaaagtgatttcccaattaaaaagccttaacccggacttaaaagtattg
ggtttaactgccacgccttaccgtttaggaatgggttggatttatcatcatcattatcat
ggttttgtaagaggctcgagcgagagcccatttgtaaaatgtatttatgaattgccgctg
cgttatatgattaaaaacaaattcttaacgccgcccgaagtacttgatgctgctatttgt
cattatgactttgctgccttagcgacagatagctttggtcgagtcagtggcaatgattta
aaccaaatgcttaaagaaaaccaacgtgcgactaaagctatcattgagcaagtgattgaa
ctgagtaacgagcgtcaaggtgtgatgatttttgcagcgaccgttgagcatgctaaagaa
attttaagctatttggctgagcataatgcggtattagtgacgggcgaaaccgataataca
acccgcgataatatagtgcgtgattttaaggcacgtaaaattaaatatttggtgaatgta
tcagtgcttacaacggggtttgatgcaccgcatgttgattttattgcgattttacggcca
acagaatcggtgagtttataccaacaaattgtaggtcgaggtttacgtttaagtccgggt
aaaaccgactgtttagtaattgattatgccggcaatggctttgatttattttacccagag
gtgggggctaaaaagccatcgacagatagcgagccggtgcaagtgctttgccctggttgc
ggttttgccaatacattttggggtaaaaccgatgagcagggtaaagtgatagagcatttt
ggtcgccgttgccaaggacttttgcttgatgatgagaccgcgcaaagtcaacagtgcgat
tatcgctttcgatttaaagaatgtgatagctgtggcgccgaaaacgacatcgctgcacgt
gtttgccatgcgtgtcaggcattattggttgatcccgatgataaattacgggcagcactt
aatttaaaagatgctttggtgctgcgttgttcgggcatgacaatagagccatttggcagc
gagaaagtaaaaatcacttattttgatgaagatggtgccagttgtgatgaagtgtttaat
ttagctgtaaaggcagcctgttatatttttaatcaacaatttggtaaacgtgttgcgcta
gggaaaattccgagcacatttgccaatgtggccgaagtcttagcagcaaaagcgttgtta
gctcatccggactttgtcattgcgcgtaaagcaaagtacggctggaaaattgcagataaa
atttttgattatcaaggtgtatttcgtaaggcttatcaagagcgataa
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