Pseudoalteromonas tunicata: PTUN_a3212
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Entry
PTUN_a3212 CDS
T05187
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil1939-C5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptu03009
]
PTUN_a3212 (rumA)
Enzymes [BR:
ptu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PTUN_a3212 (rumA)
Ribosome biogenesis [BR:
ptu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PTUN_a3212 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
MTS
Methyltransf_25
PCMT
Methyltransf_15
PrmA
Cons_hypoth95
TRAM
Methyltransf_23
DOT1
TehB
Methyltransf_11
EP400_N
PDGF
FtsJ
Methyltransf_12
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
ATC95583
LinkDB
All DBs
Position
I:complement(2962982..2964304)
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AA seq
440 aa
AA seq
DB search
MAQFFKPQKATQTKTKREITIDSLDHEGVGVSRENNKVCFVEGALTGETVLAQPQQSKAK
FERLTTVKVLNASAHRVKPFCVHFSQCGGCSLQHLELSQQLVEKQHAVTQLFNKFAKIDQ
LNWQPAIESAPLHYRRSARIAVFYDKVKRSFNVGFRQKGSKKIVDIGQCDVLDIRYQAVF
REFSSLLPQLKNGQAITHLQLCGVEHAHLVVRHIAPLAASDIAAIERVCLTHQWLLVLQG
QAGEVELNDLAPPSYQLSEQSLRFEFGLDNFIQVNAAVNQQMLSQAINWLALDKNEKVLD
LFCGIGNFSLVMATNALAVVGVEGVESSVQMAKHNSALNQLSNTQFYCQDLSQDMASQAW
FSEHYDVLVLDPSRTGAFEILQQLKLKRFKRILYVSCDPVTLARDSQLITQAGFTLDKIA
LMNMFPHTGHIETMVLFVKR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttttttaaacctcaaaaagccacacaaactaagactaaacgtgaaataacg
attgactctctagaccatgaaggtgtgggtgtaagccgtgaaaataataaagtgtgtttt
gtcgaaggggcgttgacaggcgaaacagtgttggcgcagccacagcagagtaaagctaag
tttgaacgtttaaccacagttaaagttttaaatgccagtgcgcatcgggtaaagcctttt
tgtgtgcactttagccagtgcggagggtgctcgttacagcatcttgaattatcacagcaa
ctggtcgaaaaacaacatgcggtaacgcaactgtttaataaatttgccaaaatcgatcag
ctcaattggcagcctgctattgaatcagcccctttacactatcgacgtagtgctcgtatt
gcggtgttttacgataaagtaaaacgtagttttaatgtcggatttaggcaaaaagggtca
aagaaaattgttgatattggccaatgtgatgtactcgatatccgttatcaagcagtgttt
cgtgagttttcgagcttattaccacaattaaaaaatggccaagccattacccatttacag
ctatgtggtgttgaacatgcgcatttagtggtgcgccatattgcccctttagcagctagt
gatatcgccgcaattgaacgagtatgtttaactcatcaatggttgctggttttacaagga
caagcgggagaagttgaattaaacgacttagccccaccgagttatcaattaagtgagcag
tcgcttcgctttgaatttgggttagataattttattcaagtgaatgctgcggttaatcag
caaatgttatctcaagcaatcaattggttagcgcttgataaaaatgaaaaagtgctggac
ttattctgtgggatcggtaacttcagtttagtcatggcgaccaacgcattggcggtagtt
ggggttgaaggtgttgaatcttcggtacaaatggctaagcacaatagtgcacttaatcag
ctttcaaatactcaattttattgccaagacttaagtcaagatatggcaagccaagcttgg
tttagcgaacattatgatgttttagtacttgatccttcgcgcacgggcgcttttgaaatt
ctacaacaactaaaacttaaacggtttaagcgcattttatatgtttcatgtgatcctgtg
acactcgctcgagatagccagttgattactcaggcaggatttacactcgataaaatcgca
ttaatgaatatgtttccacatacaggtcatatcgaaacgatggtcttgtttgttaagagg
tag
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integrated database retrieval system
