Pseudoalteromonas tunicata: PTUN_a3378
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Entry
PTUN_a3378 CDS
T05187
Symbol
truD
Name
(GenBank) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptu03016
]
PTUN_a3378 (truD)
Enzymes [BR:
ptu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PTUN_a3378 (truD)
Transfer RNA biogenesis [BR:
ptu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PTUN_a3378 (truD)
Prokaryotic type
PTUN_a3378 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATC95719
LinkDB
All DBs
Position
I:complement(3117553..3118584)
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AA seq
343 aa
AA seq
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MSELNYLYGKPLSHADFKKEPEDFMVDEVLGFELSGAGEHVCLQVVKKGENTQFVAKLIA
KHAGVNPRDVSYAGLKDRHGVCTQWFSVPVPIKTDIDFSVLNSDTLFIVQQVRHHRKLRT
GCHQANKFTIRLRNVSEPLDVFCRINALRAGVPNYFGEQRFGRDGHNLTMAQRMFAGERI
RDKKLRGIVISAARSHVFNQIVSKRVLEHGLAKTMHEEVFLLDGSNAFFKEPINSLNLDR
LAANDIALSAPLIGKGDEALTAQELLWLADFQQWRDGLIELGLKTERRLLRLVPQGLTIK
QEDSTTLVIEFALAKGCFATALLRELVLYRDASPSHKEQEEEQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattaaattacttatatggtaaaccgctttcgcatgctgactttaaaaaagag
cccgaagatttcatggttgatgaggttttagggtttgagctcagtggtgcgggtgagcat
gtttgcttgcaggtggtaaaaaaaggtgaaaatacccaatttgttgctaagttgattgcg
aaacatgcaggggttaatcctcgtgatgtgagttatgccgggcttaaagatcgccacggg
gtttgtacacaatggtttagtgtgccagttccaattaaaactgacatcgattttagtgtg
cttaacagcgatacactgtttattgtgcagcaagtgaggcatcaccgaaaattacgtact
ggttgtcatcaagctaataaatttaccattaggcttcgaaatgttagtgagccgcttgat
gtgttttgccgcatcaatgcgctcagggctggtgtgcctaattattttggtgagcaacgt
tttggtcgtgatggccataatttaacgatggcgcagcgcatgtttgcgggcgaacgtatt
cgtgataaaaaactgcgtggtatagtgatttctgccgcgcgttcccatgtttttaatcaa
atagtcagtaaacgtgtgcttgaacatggtttagccaaaaccatgcatgaggaggtattt
ttactcgatggcagtaatgcattttttaaagagccaattaatagccttaatttagataga
ctagcagcgaatgatattgctttatcggcacctttgataggtaaaggtgatgaggcgctt
acggctcaagagttactttggttggctgattttcaacagtggcgagatggtttaattgag
cttggtttaaaaacggagcggcgtttattacgcctagtaccgcaagggttaactattaag
caagaagactcaacgacgctagtaattgaatttgctttggcaaaaggttgttttgcaact
gcattattgcgtgaacttgtactctatcgtgatgcatccccaagtcataaagaacaggaa
gaagaacaatga
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