Pseudoalteromonas tunicata: PTUN_a3522
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Entry
PTUN_a3522 CDS
T05187
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptu03021
]
PTUN_a3522 (rpoH)
Transcription machinery [BR:
ptu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PTUN_a3522 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
ATC95833
LinkDB
All DBs
Position
I:complement(3241088..3241954)
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AA seq
288 aa
AA seq
DB search
MSKDLQAMMLTVPQQSGSMEGYLQAVSGIAMLSAEDEQALAVKLQQDGDLDAARQLIMSH
LRFVAHIAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNPEEVSTVANELGVTEKDVREMEARMSS
QDMVFDLTTDDDDSTSATQYSPVQYLTDNSVDLADKIEEEQWEEQTHNRLFHALKSLDER
SQDIVQTRWLSDDKATLQDLAVKYDVSAERVRQLEKTAMKKLQHLLTA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagatttacaagcaatgatgttaacagttccacagcaaagtggcagcatggaa
ggatatcttcaagctgttagcggtattgcaatgctaagtgctgaagatgaacaagcatta
gcagtaaaactacagcaagatggtgacttagatgctgcaagacagcttatcatgtcgcat
ttacgttttgttgctcacatagctaaaggttattcgggctacggactgccacaagctgat
ttaattcaagaagggaatatcggcttaatgaaagctgtaaaacgcttcgaccctactgta
ggcgttcgtttggtatcatttgcagtacattggattaaagctgaaattcatgaatatgtg
ctaaaaaattggcgtattgtaaaagttgctactacgaaagctcagcgtaagttatttttt
aatttgcgtaagaataaaaagcgtttaggttggtttaatcctgaagaagtttcaacagtt
gccaatgaattaggcgtgacagaaaaagatgtacgtgagatggaagcacgaatgagcagt
caagacatggtgtttgacttaacaaccgatgatgatgattcaacttctgcaacgcaatat
tcccctgtgcaatatttaacagataatagtgttgatttagccgataaaattgaagaagag
cagtgggaagagcaaactcacaatcgtttattccacgcattaaaaagtttagatgaacgc
tctcaagatatcgttcagacccgttggttaagtgatgacaaggctacactacaagattta
gcggtaaaatatgatgtttcagctgaacgtgttaggcagcttgagaaaacagcaatgaag
aaattgcagcacctgttaacggcttaa
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