Pseudoalteromonas tunicata: PTUN_a3552
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Entry
PTUN_a3552 CDS
T05187
Symbol
rimK
Name
(GenBank) ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptu03009
]
PTUN_a3552 (rimK)
Ribosome biogenesis [BR:
ptu03009
]
Prokaryotic type
ribosomal protein modification factors
PTUN_a3552 (rimK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
R2K_3
Motif
Other DBs
NCBI-ProteinID:
ATC95861
LinkDB
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Position
I:complement(3268088..3269002)
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AA seq
304 aa
AA seq
DB search
MKIAILSLGPQLYSTQRLKEAGEQRGHQVDVINTLHCYMDITSNNPQVRYDGEALPKYDA
VIPRIGSEITFYGTSVVRQFEMMDTFALNSSIAISRSRDKLRSLQLLSKKGIGLPRTGFA
CHPDKIGDVIKNVGGAPVVIKLLEGTQGIGVVLGETQNAAESIIEAFMGLNANILVQEFI
KEACGADIRCFVVGGKVVAAMKRQAPEGEFRSNLHRGGSAEVVKLSKAERETAIQSAKAM
GLNVAGVDILRSNRGPVVMEVNSSPGLEGIEGATGIDVAAAIIEFIESHTSKQKFSKIGC
RIQG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatagccattttaagcctcggaccacaactttactcaacacagcgccttaaagaa
gcgggtgaacagcgtggtcatcaggttgatgtgatcaataccttgcattgctatatggat
atcaccagcaacaatcctcaagtacgttacgatggcgaagcgttacctaaatatgatgct
gtgatcccaagaattggttcagagatcactttttatggtacttcagtagtacgccaattt
gaaatgatggacacctttgcactcaatagctcaattgctatttctcgttcgcgggataag
ctgcgctcattacagttgttatcgaaaaaaggaattggtttacctcgcaccggttttgct
tgccatcccgataaaattggtgatgtgatcaaaaatgtaggaggcgcaccggtagttatt
aagctgcttgaaggaacgcaggggattggtgttgtgctgggagaaacccaaaatgcagct
gagagtattattgaggcttttatggggcttaatgccaatattttagtacaagagtttatt
aaagaagcctgtggtgcggatattcgttgttttgtggtgggcggcaaagtggttgctgca
atgaaacgtcaagcgcccgaaggtgagtttcgctctaacttgcatcggggtggcagtgct
gaagtggtgaaactcagtaaagccgaacgcgaaacagccattcaatcagccaaagcgatg
gggcttaatgttgctggggttgatattttgcgctcaaaccgaggccctgtggtcatggaa
gttaattcatctccaggtcttgagggcattgaaggtgctacaggaattgatgtggctgca
gccatcatagaatttattgaaagccacactagtaagcaaaaatttagtaaaattggttgt
cgtattcagggctaa
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