Pseudoalteromonas tunicata: PTUN_a3948
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Entry
PTUN_a3948 CDS
T05187
Name
(GenBank) hypothetical protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptu03000
]
PTUN_a3948
Transcription factors [BR:
ptu03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PTUN_a3948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
Sigma70_ECF
HTH_10
HTH_40
Sigma70_r4
PF0610-like_N
HTH_24
HTH_5
HTH_7
DNA_pol3_delta_C
RepB
Motif
Other DBs
NCBI-ProteinID:
ATC96200
LinkDB
All DBs
Position
I:3667819..3668475
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AA seq
218 aa
AA seq
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MKSSAFILLEQNPINNIGLDVLSPLLKTQGIEVTHGDDPAAIAEQTKLLFIEASAENAWE
QLQNHLRAITVDCDIILFNINENTELANRALLSGIRGVFYATDNADVVMKGIRLLLDNQL
WYRRNIMCNALSRLLHFNKDNILQLTDTLAEPISLTKREKAIIVLMSKGCKNKEIADELS
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPTELR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttcagcatttattttgttagagcaaaacccaattaataatattgggcttgat
gttttatcaccgcttttaaaaactcaaggtattgaagttacgcatggtgatgatccagca
gcgatagcagaacaaacaaaactactttttattgaagcgagtgctgaaaatgcatgggaa
caactacaaaatcatttacgtgccataaccgtcgattgcgatatcattttatttaatatt
aatgaaaatactgaattggcgaatcgcgcattgttgagtgggatccgtggggtattttat
gccacagacaacgccgatgtggtaatgaaaggcattcgcttattactcgataatcagctt
tggtatcgccgtaatattatgtgcaatgcactgagtcgtttattacattttaataaagac
aatattttacaactcactgatacattagctgagcctatcagcctgactaagcgcgaaaag
gcgattattgttttaatgagtaaaggttgtaaaaacaaagaaatagccgatgagttaagc
atcagcccccataccgttaaaacgcatttatacagtgcatttcgtaaaacaaagtgccgt
aaccgtattgagttactttcttgggcgcagcaaaatatcccaacagagcttcgctaa
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