Pseudoalteromonas tunicata: PTUN_a4279
Help
Entry
PTUN_a4279 CDS
T05187
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ptu
Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptu03016
]
PTUN_a4279 (gidA)
03036 Chromosome and associated proteins [BR:
ptu03036
]
PTUN_a4279 (gidA)
Transfer RNA biogenesis [BR:
ptu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PTUN_a4279 (gidA)
Prokaryotic type
PTUN_a4279 (gidA)
Chromosome and associated proteins [BR:
ptu03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PTUN_a4279 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
Thi4
HI0933_like
Pyr_redox
DAO
MarR_2
Pyr_redox_3
HTH_5
DUF5088
MerR
Motif
Other DBs
NCBI-ProteinID:
ATC96471
LinkDB
All DBs
Position
I:complement(3970449..3972338)
Genome browser
AA seq
629 aa
AA seq
DB search
MIFHEHFDVIVVGGGHAGTEAALASARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLV
KEIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRKLYKEAIQQTLQNQENLKI
FQQSCDDLIVENDHVVGVVTQMGLRFSSRSVVLTVGTFLGGQIHIGMESFSGGRAGDQPS
IALAKRLRELPFRVSRLKTGTPPRIDARTVDFSKMQIQPGDTPTPVFSFMGKQSDHPTQI
PCYITYTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKIMRFADKDRHQIFVEPE
GLTTHELYPNGISTSLPFDVQLQIVQSITGFENAHICRPGYAIEYDFFDPRDLKQSLETK
FISGLFFAGQINGTTGYEEAAAQGLIAGMNAALQVQGKDAWTPRRDEAYAGVLIDDLATL
GTKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVNDERWAAFNIKIEEIEKEAQRL
KEVWIHKDHPQLEAVNNLLKAPLSREASLEELIRRPEVTYNELVKIEGLGSESTNEQALE
QVEIQIKYAGYIARQQEEIDKQLRHEMTLLPADYDYAAVSGLSNEVVAKLSDVRPQTIGQ
ASRISGITPAAISLLLVYLKKQGLLRKLA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcatgagcatttcgatgtaatcgtagtaggtggtggacatgctggcactgaa
gccgctttagcctctgctcgaatgggaatgaatactctgctgctaacgcataatatggat
acacttggccaaatgtcatgtaatcctgcgatcggtgggatcggaaaaggtcatttagta
aaagagattgatgcacttggcggtgctatggctcaggcgattgataaaggtggtattcaa
tttagaacacttaattcatcaaagggccctgcggtccgtgctacgcgagcacaagcagat
cgcaagctttacaaagaagcaatccaacaaacgttacaaaaccaagaaaatttaaaaata
tttcaacaatcatgtgatgatctgattgttgaaaacgatcacgttgttggtgttgtcaca
cagatgggacttcgtttttcaagccgctctgtagtattaaccgttggtacatttttaggt
ggccaaatccatatcggtatggaaagttttagtggtggccgtgcaggtgatcaaccttca
atcgctttagctaaacgtctacgtgagttgccattcagagtaagccgtttaaaaacgggt
actccaccacgtattgatgcacgtactgttgatttttctaaaatgcagattcagcctggt
gatacaccaactcctgtattttcatttatgggtaagcaaagcgatcatccaactcagatc
ccttgttacattacttacactaatgaaaaaacacatgatgtgatccgtaataatttagat
cgttcaccaatgtatgcaggcgttattgaaggtattggtccgcgttattgcccgtcgatc
gaagataagatcatgcgttttgcagataaagatcgtcatcagatttttgttgaacctgaa
ggattaacaacacacgagttatatcctaatgggatctcaacaagtttaccttttgatgtg
caattacaaattgtgcaatcaatcaccggttttgaaaatgcacatatttgccgaccaggc
tatgccattgaatatgatttcttcgatccgcgagatttaaaacaatcactcgaaacaaaa
tttattagtggtttattcttcgctggccagatcaatggtacaacaggttatgaagaagcc
gctgcgcaaggtcttattgctggtatgaatgccgcgcttcaggtgcaaggtaaagatgct
tggactcctcgccgtgatgaagcttatgctggtgtacttattgatgatttagcgacactt
ggtacaaaagaaccgtaccgcatgtttaccagccgtgctgaatatcgtttattactgcga
gaagataatgcagatttacgcttaactgctaaaggccgtgagttaggattagtaaatgac
gaacgctgggcggcatttaatatcaaaattgaagaaatagaaaaagaagcacaacgctta
aaagaagtgtggatccataaagatcatcctcaacttgaagcggtaaacaatttactaaaa
gcgcctttatcaagagaagcaagtttagaagaattgatccgtagacctgaagtaacttat
aacgagctagttaagattgaaggtttaggatctgaaagcactaatgagcaagctttagag
caagttgaaattcaaattaaatacgcaggttacatcgcgcgtcaacaagaagagattgat
aaacagcttcgtcatgaaatgactttattacctgctgattatgattatgcagccgtttca
ggtttatcaaatgaagttgttgcaaaactttcagatgtacgtccgcaaactataggccaa
gcatctcgtatttcaggtatcacacctgcagcaatttcgttattattagtttatcttaag
aagcaaggtctgcttcgtaaactggcttaa
DBGET
integrated database retrieval system
