Paenibacillus tundrae: V6W81_00020
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Entry
V6W81_00020 CDS
T11276
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ptun Paenibacillus tundrae
Pathway
ptun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V6W81_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_00020 (recF)
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V6W81_00020 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
DUF2813
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WWM61506
LinkDB
All DBs
Position
3003..4115
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AA seq
370 aa
AA seq
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MFVNSIELQQFRNYEHLKLDSFGPVNLLIGQNAQGKTNLAEAIFALALTKSHRTSRDKEL
IRFGEERARLTAEVDKKYGSVKLELALSQQGKKAKINGLEQRKLSDFVGTLNVVMFAPED
LEIVKGTPGVRRRFLDMEIGQVAPGYLYHLQQYQKVLVQRNNLLKQLWGQNASAQTMLEV
WNEQLVEHGVKIVKKRKQFIKKLQKWAETIHQGITGGGEVLRLAYLPSFSEASEEDEAVL
MDQFMIKLSQMKEQEIRRGTTLSGPHRDDLSFFINDREVQTYGSQGQQRTTALSIKLAEI
ELIHEEIGEYPVLLLDDVLSELDPFRQTQLIETFQSKVQTFITATGIESLNLDKLKDASI
YHVHAGQVER
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgtcaacagcattgagctgcagcaattccgaaattatgagcatctaaagctggac
tcttttggccctgtgaacttactgatcggtcaaaatgctcaaggtaagaccaatcttgca
gaagccatttttgcactggcccttacaaagagccatcgtacatctcgcgataaggagcta
attcgtttcggtgaggaacgtgctagactcactgcagaagtcgacaaaaagtatggatca
gttaaactggagctggcattgtcgcaacaaggcaaaaaagcaaagattaacgggttagag
cagcgcaagttaagtgattttgtcgggacgctaaatgtggttatgtttgcccccgaagat
ctggagatcgtcaaaggcacgccgggggttcgccgccggttccttgatatggagattggt
caggttgccccaggttacctataccatctgcagcagtaccaaaaagtacttgtacagcgc
aacaatttgctcaaacaactatggggacagaacgcctcagcccagacgatgcttgaagtc
tggaacgagcaactggtcgagcacggtgttaaaatcgtcaaaaaaaggaaacaattcata
aagaaactccaaaagtgggcagaaaccattcatcaaggcatcactggaggcggagaagta
cttcgtttagcctatcttccttccttcagcgaagcgtctgaggaagatgaagctgtttta
atggaccaatttatgataaaattatcacaaatgaaagagcaggagattcgccgaggcaca
acgctaagtgggccacatcgggatgacctgtcctttttcattaacgaccgggaagtacaa
acgtatggctcgcagggacagcaacgtacaactgcgttgtctattaaactcgcggaaatc
gagctgatacacgaagaaatcggagaatatccggttctgttgcttgacgatgtattatct
gagctggatccttttcgtcagacgcagctgatcgagacgttccagagtaaggtccaaacc
tttattacagctaccggaatcgagagcttgaatcttgataagctcaaagatgccagtatt
tatcacgttcatgccggacaggttgaacgctaa
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