Paenibacillus tundrae: V6W81_04665
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Entry
V6W81_04665 CDS
T11276
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun00052
Galactose metabolism
ptun00511
Other glycan degradation
ptun00600
Sphingolipid metabolism
ptun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
V6W81_04665
09103 Lipid metabolism
00600 Sphingolipid metabolism
V6W81_04665
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
V6W81_04665
Enzymes [BR:
ptun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
V6W81_04665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
CBM_6
Glyco_hydro_2
Glyco_hydro_2_N2
Invasin_D3
BetaGal_ABD2
SQHop_cyclase_N
BetaGal_gal-bd
Big_1
Motif
Other DBs
NCBI-ProteinID:
WWM62315
LinkDB
All DBs
Position
1072596..1076288
Genome browser
AA seq
1230 aa
AA seq
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MNSRKLFNDGWAFAKSGLDVTEPGGLTFEPVELPHDWLIYNTLDLYEDSIGWYRKSFQVT
KDDKHRMLCFDGVYMDSSVYVNGQLVGEWKYGYSAFEHEITAALVEGDNEIIVKVVHQSP
NSRWYSGAGIYRNVWLKTRDHNHIVTNGTYVSMQKQSDGWQVEVDTDVVIDRDAQLMHTL
LYEGKVVATTTAAVTLDTQQVEDGYIANAGYDSKSSNASTITNRQQFVVENPNLWGTEEP
HLYQLVTDLQVASVDHDQTHAAAQAQAEAEAGTESPTENQNAQTQIQHQGSLGYETIESF
TQNVGFREVRFDPQDGFLLNGVKMKMNGVCEHHDLGALGAAFNLVALRRRFELLQDMGVN
AIRTAHNMPAKEFMELADEMGMLVVSEAFDMWERAKTPYDYARFFPEWAHTDVKSWVMRD
RNHPSLMMWSIGNEIYDTHADERGQEVTRMLMDYVLEFDPKHNARVTIGSNYMPWENAQK
CADIVKLAGYNYAEKYYDKHHEEHPDWIIYGSETASVVQSRGIYHFPFEQSILADDDEQC
SALGNSTTSWGAKSAEACILAERDTPYSLGQFLWTGFDYIGEPTPYHTKNSYFGQIDTAT
FPKDSYYIYQSAWTDYKKAPMVHLFPYWDFSPGQVIDVRVCSNAPKIELQLNGDTIGTYN
IDHAHGKQLVGWWKVPYVAGELKAIAYDEVGNVIATDVQRSYKDAQAVRLQADREQLTAN
GKDLIFVEINVEDEDSNLVQNANNRVQVRVTGAGRLLGLDNGDSTDYDPYKGTSRRLFSG
KLMAIIGATNEPGTVKIEVSSEGLVGASAEFQAVHVNAGTDASENSTPGIHVQELNDQES
DAQDTKVQAVFDRNEERAIHTGKAEEIPLRKIEIVSPEGQLLDPSTPAMVVQAKLYPENT
SYRDIEWSVVNDAGIESNISKVELLDSDSVGNSAEAGQVKVTALGDGAFRLRATSKNGTD
KIKLISQLEFTATGLGTAYHDPYAFISGGLYDYSKGDVGNGNERGVATSRDGETHVGFRN
IDFGAYGSDTITIPIFALSNEEYPIQIWEGMPGEEGSTLIADVVYQKESRWNVYQEDTYT
LSKRLRGITSICFVLKQKIHIKGFTFERQSRAFEQNAAASCDQLYGDTFTIQGDSVEGIG
NNVSLEFDQMDFTAAGTSKLVICGHSPIDKNTIHIRFSGPDGQSNQLVEFTQSEGYEERV
FELEQVTGVQKVTFIFLPGSQFDFGWFRFE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgagaaaactctttaatgatggatgggcattcgccaaaagtggactagatgtt
acggagcctgggggattaacgttcgaacctgtggagcttccgcatgattggttaatttat
aacacattggatctgtatgaggatagtattggctggtatcgcaagtcgttccaggttacg
aaggatgataagcacagaatgttgtgttttgacggggtgtatatggattcatccgtgtat
gtgaatgggcagttggtaggggaatggaagtatgggtattctgcgtttgaacacgagatt
acagcggccttggtcgagggagataatgaaatcatcgtcaaggtggtgcatcagagccct
aacagcaggtggtactcgggcgcggggatctatcgtaatgtatggctgaaaacgagggat
cacaatcatatcgtcaccaatggtacgtatgtatccatgcagaagcagtccgatggctgg
caggttgaagtggatacagatgtcgttattgatcgggacgcacagcttatgcacacactg
ctctatgagggcaaggttgtagcaaccacaacggcggctgtgacgctggatactcagcaa
gttgaggatggttatatagctaatgctggttatgatagtaaatctagcaatgctagtact
attacgaatcgccagcaatttgtagtagagaacccgaatctgtggggtacggaagaaccg
catctctatcaattggtgaccgatttacaggtggcgtcagtggatcacgaccagactcac
gctgcagctcaagctcaagctgaggctgaggcggggactgagagtccaactgaaaaccag
aatgctcagacgcagatacagcatcagggtagcctaggttatgaaacgatagagagtttc
acccaaaacgttggtttccgagaagttaggtttgatccgcaggatggcttcttgctgaat
ggggtcaaaatgaaaatgaacggtgtctgcgaacaccatgatctgggtgctttgggtgca
gcattcaatcttgtcgctctgcgtagaaggtttgagttgttacaggatatgggtgttaat
gccattcgaaccgctcataatatgcctgccaaagagttcatggagcttgctgatgagatg
ggcatgctggttgtttcagaagcttttgacatgtgggagcgtgccaagaccccttacgat
tatgcgagattcttcccagagtgggcgcatacggatgtaaagagctgggttatgcgtgac
cgcaaccatccaagcttgatgatgtggagtattggtaatgagatctatgatacgcatgca
gatgagcggggacaggaagtcacccggatgctgatggattatgtgctggaattcgatccg
aagcataatgcgcgtgttacgattggttcgaactatatgccttgggaaaatgcacagaaa
tgtgcggatatcgtgaagcttgcgggatataattacgcggaaaaatattatgataagcac
catgaggaacatccggactggattatctatggcagtgagacggcatctgtggtgcagagt
cggggaatctatcatttcccattcgagcaatccattctggctgatgatgatgagcagtgc
tccgcgctgggaaacagtacaacaagctggggagcgaagtcggcagaggcgtgtattttg
gcagaacgggataccccttattcgctgggacagttcctgtggacaggattcgattatatc
ggtgagccaacaccgtatcatacaaagaactcttattttggacagattgatacggcaact
ttcccgaaagactcctattatatctaccaatcagcatggacggattacaaaaaggctcca
atggtgcacctattcccgtactgggatttcagccctggtcaggtcattgatgtacgcgtg
tgcagtaacgcgccaaagattgaactgcagcttaatggtgatacgatcggcacgtataac
attgaccatgctcatggaaaacagcttgttggctggtggaaagtgccttatgtcgctggt
gagctgaaggcgattgcgtacgatgaagtgggcaatgtgattgcaaccgatgttcagcga
tcttacaaggatgcacaggctgttcgtcttcaagcagaccgtgagcaattaactgcgaat
gggaaggatcttatttttgtcgagatcaatgtggaagatgaggatagcaacctggtgcaa
aacgccaacaatcgtgtgcaggtacgcgtgacgggtgcaggacgtttgttagggctggat
aacggggatagtacggattatgatccttacaaggggacaagccgcaggttgttcagtggc
aaactaatggcaatcattggcgcaacgaatgaacccggaacagtgaagatcgaggtgtcc
tcggaagggctagtaggggcatctgcggaattccaagctgtgcatgtgaatgcaggtacc
gatgcttctgagaatagtactccgggaatccatgttcaagaattaaatgatcaggaaagc
gatgctcaggatacgaaagtacaggctgtattcgatcgtaatgaggaacgggctattcat
accggcaaagcagaagaaattcctttgcgcaaaattgagattgtaagcccagaaggacag
ttgttagacccttcaacgccagcaatggtggtgcaagcgaagttgtacccggagaataca
tcgtaccgagatatcgaatggtctgtggtgaatgatgcgggaattgagtcgaacatttcc
aaagtagaattgctcgattcggactcggttgggaattcggctgaagcaggccaagtgaag
gtaactgcgctgggagatggtgcattccgccttcgagctacgagtaagaacggcacggac
aagatcaaactgatctcccagcttgaattcactgccaccggacttggaacggcatatcac
gatccatacgcctttatctccggtgggctctatgattattcgaagggcgacgtgggcaat
gggaacgaacgtggtgtagcgacgagccgagatggggagacacatgtgggcttccgcaat
atcgacttcggtgcatatggttcggataccattacgattccgatctttgctctatcgaat
gaagagtatcccattcagatctgggaaggtatgcctggtgaagagggaagcacattgatt
gctgatgtggtatatcagaaggaatccagatggaatgtgtaccaggaagacacgtatacg
ttatccaaacggctgcgtggaattacatcgatttgttttgtactgaagcagaagattcac
atcaagggctttacctttgaacgccaaagccgagcctttgagcagaatgccgctgcatcg
tgtgaccagctgtatggagatacgtttacgattcaaggggattcggttgaggggatcggg
aacaatgtctcactggagttcgatcaaatggacttcacggcagcaggtacatccaaactt
gtaatctgcggtcattcgcctatcgacaaaaacacgattcatattcgtttctcaggaccg
gatgggcagagcaatcagctcgtcgagttcacacagtcagaagggtatgaggagcgagtg
tttgagcttgaacaggtgacaggtgtgcaaaaggtgacctttatcttcctgccaggcagt
cagtttgactttggctggttccgttttgagtga
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