Paenibacillus tundrae: V6W81_08545
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Entry
V6W81_08545 CDS
T11276
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ptun Paenibacillus tundrae
Pathway
ptun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
V6W81_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_08545
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
V6W81_08545
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Spectrin_SESTD1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWM63029
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Position
1917027..1919396
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AA seq
789 aa
AA seq
DB search
MDTKILHTLEYRKILNTLQGFAQTTMGKKKADTLVPIGDLDEVKRLLQQTDEAFKFDRLK
GSPSFGGIVDITASIKRSEIGGTLNPHELLSISNTTLASRRLKRQIATLHEDEKVESLFF
ISDQLSEQKALEDEIRSCIEDNAEVADSASVTLAQIRRELRGGEARIREKLDSMIRSSTV
SKMLQDQLITIRGDRFVIPVKAEYRSYFGGIVHDQSGSGATLFIEPESIVAMNNKLRETR
IREEREIEVILQKLTALVSEQAEWLLDDVDLLGTLDFIFAKSRLARELKATLPRMNDRGF
IKLKKGRHPLIAIENVVPTDIELGNDYTSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFV
PAEDGSQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIIRILKNMTTKSLVLLDELGAGT
DPAEGSALAISILEHMHQTGCRMVATTHYSELKAYAYERKGVINASMEFDVNTLSPTYRL
LVGVPGRSNAFAIAERLGLPTNILDYARGEVKEEDQRVENMIASLEENRLTAEQEREKAE
HLRADMEKLRSRHQSELEKLEQQRDRRIEKAEEDARLIVDKARAEAEKIIADLRQLAMEE
GASVKEHKLIAARKQLDEAEPEKRKKTVKRTASAPKARAIGPGDEVLVYSLNQKGHVVEM
SGSKEAVVQLGIMKMKVSLNDLELKQSASTVVTPKQKPVTGMKRTRDDNVKSELDLRGAN
LEEALMETDRFIDEAFLANLGQVYIIHGKGTGILRSGIQDYLRKHRHIKSYRLGNYGEGG
NGVTVAELE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
ttggatacgaaaattttacacacattggaataccgcaaaattttaaatacattgcaaggc
tttgcccaaacgacaatgggcaagaagaaagcggatactctggtgccaattggtgaccta
gatgaagtgaaaagattactacagcaaacggacgaagcctttaagtttgatcgattgaag
ggttcgccatctttcggtggcatcgttgacattacagcctccattaaacgttcagaaatt
gggggcaccttgaatccacatgaacttctcagtatttcgaacactacccttgcttcacgt
agactcaaacggcaaattgctacacttcatgaagatgaaaaggtggagtcgctgttcttc
attagtgaccagttgtcggagcaaaaagcactagaagatgaaattcgtagctgtattgaa
gataatgctgaagttgctgatagtgcgagcgtcacgcttgctcagattcgtcgcgaactt
cggggcggtgaagctcgaatcagggagaagctggattccatgatccgctcatcaacggta
tctaaaatgctacaggatcagttgattactattcgtggggatcgctttgtaatcccggta
aaagcagagtatcgttcttacttcggggggattgtacatgatcagtcgggttcaggtgcg
actctgtttattgaaccggaatcaattgttgcaatgaataacaaattacgtgagactcga
attcgggaagagcgcgaaattgaagttattttgcagaaattgacagcccttgtcagtgag
caggcagaatggctgttggatgatgtcgatctattggggacgcttgatttcatctttgcg
aagtcacgtttagcgcgcgaactgaaggcaaccttacctcggatgaatgatcgcggcttc
attaagttgaagaaggggcgtcatccgctaattgccattgagaatgttgtgcctacggat
attgaattaggcaatgattatacatcgattattgtcacagggccgaatacaggtggtaaa
acagtcacgctaaaaacgattggtttgctcagtttgatggccatgtctggattgtttgtc
cctgctgaagatggcagtcagctctgtgtatttgatgcgatctatgccgatattggagac
gaacagagtattgaacagaacttgagtacgttctccagtcacatgaccaacattattcga
attttgaaaaacatgacaacgaaaagccttgttctcctcgatgagcttggcgcgggaaca
gatccggcagaaggttcggcactagcgatttccattctggaacatatgcatcagaccggt
tgtcgtatggtagctacaacgcattatagtgagctgaaggcatacgcatatgaacgcaaa
ggcgttatcaatgcgagtatggaatttgatgtgaatacattaagtccaacctatcgtttg
cttgttggtgttcctggtcgaagtaatgcctttgcgattgcggaacgtcttgggcttcca
actaacattctggattatgctcgtggcgaggtgaaggaagaggatcaacgggtggagaat
atgattgcttcactagaagagaatcgactgactgccgagcaagagcgtgagaaggcggaa
catttacgtgcagacatggagaagctacgtagtcgacatcaatccgaactggagaagctg
gaacagcagcgtgaccgccggattgagaaggcagaagaagatgcgcgcctgattgtggac
aaagctagagcagaagctgagaaaattattgctgatctgcgtcagctagctatggaagaa
ggagcatcggttaaggagcacaagctaattgctgctcgtaaacaattagacgaagctgaa
ccggagaaacggaagaagaccgttaaacgcacggcatccgctccgaaggctcgtgctatt
ggcccaggcgatgaagtgttagtgtacagcttgaatcagaaaggtcatgttgttgagatg
tctggaagcaaggaagcagtggtacagcttggtattatgaagatgaaagtatcactgaat
gatcttgagctgaagcagtctgcttcaactgtagtgacacccaaacaaaaacctgtgacc
ggaatgaaacgaactcgtgatgacaatgtcaagagcgagctggacctgcgcggtgccaat
ttggaggaagctctgatggaaacggatcgttttatcgacgaagcgttccttgcgaatctg
ggtcaggtatacattatccacggtaaaggaacaggaattttacgttccggtattcaggat
tatctgcgcaagcatagacatattaaaagttatcggctgggcaattatggggaaggcgga
aacggtgttaccgtagcagaactggagtag
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