Paenibacillus tundrae: V6W81_09570
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Entry
V6W81_09570 CDS
T11276
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun03030
DNA replication
ptun03430
Mismatch repair
ptun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6W81_09570
03430 Mismatch repair
V6W81_09570
03440 Homologous recombination
V6W81_09570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptun03032
]
V6W81_09570
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_09570
Enzymes [BR:
ptun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6W81_09570
DNA replication proteins [BR:
ptun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6W81_09570
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6W81_09570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF8098
Herpeto_peptide
HROB
Motif
Other DBs
NCBI-ProteinID:
WWM63225
LinkDB
All DBs
Position
2118451..2122464
Genome browser
AA seq
1337 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARISDLVDRAADLGMTSLALTDHGVMYGAIPFYKACVARGI
KPIIGCEAYMTAGSRKERGSRKDQPIHHLILLAKNMTGYRNLMKLCSIGHLEGFHYKPRI
DMESLQAHHEGIICLSACLGGEVPQHLLHGREEEARRAALRYKNIFGEDFYLELQDHGLS
EQKRVNPQLMKLAAELEIPLVVTNDAHYLLEEDAELQDVLICIGTGKTVDDETRLRIGTN
QLYLKSGEDMARLFPHVPEAIANTVRIADSCELELEFGKSILPEYRPLPEGQSPSTYLRQ
LCEVGMEERYSNTVRWTDKEQRSELEQRLDYELRVIDSMGFSDYFLIVWDFIAYAHSQNI
VTGPGRGSSAGSIVAYTLKITDVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVID
YVADKYGKAHVAQIITFGTMAARAAVRDVGRALNVPYGEVDKAAKLIPAQLGINIQRAME
TTPELMTLYETKPKTRELLDMAMKVEGMPRHASTHAAGVVISRDPLTDAVPLQEGSEGTA
LTQYSMENLEAIGLLKMDFLGLRTLSIIERCLRWIGEHGEVPDFRHIPDDDAQTYEMLGR
GDTMGIFQLESAGIRRVMKDMKPSVFEDIISVLALYRPGPMEFISKYIQGKHGQIAVDYP
HADLEPILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERGHFVQ
GSLKQGYSEAEADLVYDMIVKFANYGFPRAHAAAYGVLAFQTAYLKAHYPVHFMASMLTA
VMGSHRKVAEYVVECRRMEIEVLPPDVNESGILFTPVFTATTSSDRQESNATTQTDENTE
EEATNGHDDGYDHAHYGDAPLPDDPGPEPGEEGATYEWQTSTAITEPSAKPEGTGVVTAA
TAGYSSEEENSASQPAVSFTDAGSSVESDEEAQTLTTPGAIRFGLAAVKNVGTQAMESIM
IVRKERPFDSLLDFCRRVDLRVCNKRVIESLIQAGAFDSLPGHRAQLLAMLDETVEAALK
WRKEREDLQIQLFDFVETPNWEIEYPEIPPFSASQQLELERELLGLYLSGHPLDDFEKIL
ESSGADRIMELTEAADDTMAVAAGMVVSVKSITTKQGKAMAFMELEDQIERCEVVLFPEV
WRRSQQVIGKGELLVVRAKVQQQDEGFKLLAEEVAQLTPAALEQQLRSRERRAKPGSASR
PAAAPKQPAGAGVGAGAQPSGVGSAAVRGSDAARGDTAGARSAPSGRPGAGSAEPTRRPQ
AVEQRVFVKISPQAETPEMLARLKQLLEQHPGPVATVLFYEQQQKLLALSDGYRIKPSPT
LIAEMENMLGEGTVKIK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttttgtgcatttgcatgttcacagtgagtatagtttgctggacggcgctgcg
cgtatttcggatctcgtggacagagctgcagatctcggaatgacatcacttgcgctaacc
gatcacggcgtgatgtatggcgctattcctttttataaagcgtgcgtagcacggggtatt
aagccgattatcggatgtgaggcgtatatgactgcgggctctcgcaaagagcggggaagt
cgtaaggatcagccgattcatcatttgattttgctggcgaagaatatgacaggttaccgt
aatctgatgaagctatgttcgatcggtcatttggaaggtttccattataagccacggatt
gatatggagagcttgcaggcacatcacgagggcatcatatgtttaagtgcgtgtctgggc
ggagaggtgccccagcatttgctgcacggacgagaagaggaagcacggcgggcagcgctg
cgttacaaaaacattttcggagaagacttctatcttgaacttcaggatcatggcctctcg
gagcaaaaacgtgtcaatccacagctaatgaaattagctgctgagctggaaattccgctc
gtagtgacgaatgatgctcattatctgttagaagaggatgcggagctccaggatgtgctg
atctgcatcgggacaggtaagactgttgatgatgaaactcggctgcggattggaacgaac
cagctgtacctgaaaagtggggaagacatggcgcgcttgttccctcatgtgcctgaagct
atagccaataccgttcgcattgcggattcttgtgaattggagctggagtttggcaaatct
attttgcctgaatatagacctctcccagaaggacagagcccatctacgtatttgcgtcaa
ttgtgcgaggtaggtatggaagaacggtatagcaacaccgtgcggtggacggacaaggag
cagcgttcagagctggagcagcgattggattatgagcttcgggtgattgatagcatggga
ttctccgattatttccttatcgtatgggactttatcgcttatgctcacagtcagaacatt
gtgaccggacccggtcggggttcatccgcaggtagtatcgtagcctacacgctgaaaatc
acagatgttgatcctatgaagtacaacctgctcttcgagcggtttctgaatcctgaacgg
atctccatgcccgatatcgatattgacttcagcgatgaacgtcgggatgaagtcattgat
tatgttgcggacaagtacggaaaagcgcatgtagcacagattattacctttggtacgatg
gctgctcgtgcagcagtacgtgatgttggacgtgcactcaacgtgccgtatggcgaagta
gataaagccgcgaagctgattccggctcagctaggcatcaatattcagcgggcgatggaa
acgacgcctgaattgatgaccttgtatgagactaaaccgaaaacacgtgagctgttggat
atggcgatgaaggtagaaggtatgcctcgtcatgcctccacacacgcagccggagtggtc
atctctcgggatccgctgacagacgctgttccgctgcaagaaggcagtgagggcactgct
ctgacgcaatattctatggagaatttagaggccatcggattgctcaaaatggactttctc
ggattacgtaccctttctattattgagcgttgtcttcgttggattggggagcatggagag
gtgccagatttccgccatatcccagacgatgatgcacagacgtatgagatgctggggcgc
ggcgatacgatgggcattttccaattagagtctgcgggaattcggcgtgtcatgaaggac
atgaaaccaagcgtattcgaggatattatctccgtgctggctctgtatcggccaggccca
atggagtttatatccaaatatattcagggtaagcacggtcaaatagcagtggattatccg
catgccgaccttgagccaatcctgaaagatacttacggtatcattgtctatcaggagcaa
atcatgcagattgcttcgcggatggcaggtttctcactgggtgaagccgacttgctgcgt
agagccgtgtcgaagaaaaaacgggaagtgctggatctggagcgcggacactttgttcag
ggtagcctgaaacagggatatagtgaagcagaggcagatttggtctacgatatgatcgtc
aaatttgcaaactacggtttcccgcgtgcccatgctgccgcttatggtgtactggctttc
caaacggcgtatctcaaagcccattatcccgttcattttatggcgtccatgctgacagct
gtaatgggtagccaccgaaaagttgcagagtatgtcgtggagtgtcgccggatggagatt
gaggtattaccaccggatgtgaacgagagtggtattttgtttacgccggtctttactgct
actacttcttctgatcgacaggaaagtaatgctacaactcaaaccgatgagaacacggaa
gaagaagctacgaatggtcatgatgatggctatgaccatgcacactacggtgatgcacct
cttccagatgatcctgggcctgagcccggagaagagggtgctacttatgagtggcagaca
tccactgccataaccgaaccttctgcgaagcccgaagggacgggcgttgtcacagctgct
acagcagggtattcgagcgaggaagagaactcagcttcacagccggcggtttcatttaca
gatgcagggtcatcggtggaatcggacgaggaagcacagacgcttacaacgccaggtgcc
attcgctttggtcttgctgcagtcaaaaacgtaggtacccaagcgatggaaagcatcatg
attgtgcgtaaggaacgaccttttgacagcctgctcgacttttgtcgacgtgtcgatctg
cgggtgtgtaataaacgggtaattgaatcgctgatccaagcgggagcttttgattcgttg
cccggtcatcgagcacagttacttgcgatgctggatgaaacggtggaggccgcgctgaaa
tggcgtaaggaacgtgaggacttacagattcaattgtttgattttgtggagacaccgaat
tgggagatcgaatatccggaaattccaccgttttctgcaagtcagcagttggagctagag
cgcgaattgctcggtctgtatctctctggacatccgctggatgattttgagaaaatactt
gaatccagcggcgcagatcggattatggaattgaccgaggcggccgatgatacgatggcg
gttgcggcgggcatggttgtctctgtgaagtcgattacgacgaaacaggggaaagcgatg
gcgttcatggagcttgaagaccagattgaacgctgtgaagtagttctctttcccgaagta
tggcggcgaagccagcaggtgatcgggaaaggtgaactgctcgtcgtgcgtgccaaagtg
cagcagcaggacgaagggtttaagctgctggctgaggaggtggcgcagctcacaccggcg
gcactggaacagcagctacgcagtcgcgaacggcgtgcgaagcccggcagcgcatcgcgc
ccagcggctgcgccgaagcagccggctggtgcgggtgttggagctggagcgcagcctagc
ggcgtaggctctgcagcagtgcgcggcagcgatgctgcaaggggtgacacagccggggcg
agaagcgctccgagcggacgccccggtgcaggcagtgcggagccgactcgtcggccccag
gcggtggagcagcgagtatttgtgaagattagccctcaggcggagacgcccgagatgctg
gcgcggttgaagcagcttctggagcagcatccggggcctgtagccactgtgctcttctat
gagcagcagcagaagctacttgcacttagtgacggctatcgaatcaagccttctccaacc
ctcattgccgaaatggagaacatgcttggtgaaggaaccgtcaaaattaaatag
DBGET
integrated database retrieval system
