Paenibacillus tundrae: V6W81_10170
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Entry
V6W81_10170 CDS
T11276
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun03030
DNA replication
ptun03430
Mismatch repair
ptun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6W81_10170
03430 Mismatch repair
V6W81_10170
03440 Homologous recombination
V6W81_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptun03032
]
V6W81_10170
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_10170
Enzymes [BR:
ptun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6W81_10170
DNA replication proteins [BR:
ptun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6W81_10170
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6W81_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WWM63334
LinkDB
All DBs
Position
2242558..2243295
Genome browser
AA seq
245 aa
AA seq
DB search
MREPARGNTGFWNSLRQGGVPSAIASIMGAPTAQHMAFIRSMMREQRRPEVLHTPLNELD
AVVFDLETTGFSPQHGDEILSFGAVRINGGVIVEGEQFYTLVQSKTAVPEHITELTGITQ
EMTLDAPSLLEGLHDFMSFVGGSVLVAHASGHDRAFLNAALWRTTKVRLTHRLIDTMMLA
RWLEPGRPGYGLDELLESRGITIQGRHHALEDAKMTAQLWSCYLEDMIQHNVETLGDLYT
QLSHA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagagagccggcacggggcaatacaggattttggaattcgctgcgccagggaggggtt
ccttccgccatcgcttccataatgggagcccctacggcgcaacacatggcttttatccgt
tccatgatgagagaacagcgtagacctgaggtgcttcacaccccgttgaacgagttggac
gcagttgtgttcgatctggaaacgacgggcttttcacctcaacatggagatgagattctt
tcgtttggagcagtacggattaatggaggtgtcatcgtggagggtgagcagttctacacg
ttggtacagtccaagacggcagttccagaacatatcactgaactcacgggaattacgcag
gagatgacattggatgcaccctccctcctagagggattacatgattttatgtcatttgtc
ggaggtagtgtgctcgtcgcacatgcgagtgggcatgatcgtgcttttctgaatgcagcg
ttatggcgcacaaccaaggtaaggcttacgcaccgactgatcgacacgatgatgttggcg
cggtggctggagcctggtagaccaggttacgggctggatgagctgctggaatcgagaggc
attaccattcagggtcgtcaccatgctctggaagatgcgaagatgaccgcacaactgtgg
tcatgttacttggaagatatgattcagcataatgtagaaacgttgggggatctgtacact
cagttaagtcatgcgtaa
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