Paenibacillus tundrae: V6W81_19645
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Entry
V6W81_19645 CDS
T11276
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun00300
Lysine biosynthesis
ptun00470
D-Amino acid metabolism
ptun01100
Metabolic pathways
ptun01110
Biosynthesis of secondary metabolites
ptun01120
Microbial metabolism in diverse environments
ptun01230
Biosynthesis of amino acids
Module
ptun_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6W81_19645 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6W81_19645 (dapF)
Enzymes [BR:
ptun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
V6W81_19645 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WWM59753
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All DBs
Position
complement(4381575..4382408)
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AA seq
277 aa
AA seq
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MEFTKMHGLGNDFIVVFGEEKLPADAPELAVKWCNRFFGIGADGLVYILPSEKADFQMRI
MNSDGSEAEQCGNAIRCVAKYVYDHGHVSGENITIETIGAGVQPVNLNIRDGKVETVRVD
MGEPILDGLKVPTTVDANPVVDHSIEANGQQFKFTAVSMGNPHAVIYVEDAVNFDLSTWG
PLLEVHPMFPKKINVEFATVRDRGYVDMRVWERGAGPTLACGTGACATLVSSVLNGHTDR
TAVVSLKGGDLHIEWNESDNHVYMTGPAEVVFKGITS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacgaaaatgcatggactaggcaacgactttatcgttgtatttggagaagaa
aagcttcccgcagacgcgccagaattggctgtgaaatggtgtaaccgatttttcggaatt
ggtgcggatgggctcgtctatatactgccttccgagaaagcagattttcagatgcgcatt
atgaattcagacggttccgaagccgaacaatgtggtaatgccattcgatgtgtcgcaaaa
tatgtgtatgatcacggtcatgtatccggtgagaatattacgatagagacgattggtgca
ggcgtacaaccggttaaccttaacattcgtgatggtaaggtagagacggttcgtgtggat
atgggtgagccgattttggacgggcttaaggttccaacaacagtggatgcaaatcctgtg
gtggatcattccattgaagcgaatggtcaacaatttaagtttaccgccgtatccatgggg
aacccgcacgctgttatttatgtagaagatgctgtgaattttgatctctcaacatggggg
ccactgctagaggtacatccgatgttcccgaaaaaaattaatgtagaattcgccactgtt
cgtgaccggggttatgtagatatgcgtgtatgggaacgtggagcgggaccaacgctggca
tgtggaacaggagcctgtgcaacactcgtatcgtcagttctgaacggacacaccgaccgt
actgctgtcgttagcctcaaaggtggagatttgcacattgagtggaatgaatcagataac
cacgtttatatgacagggcctgcggaagttgtgttcaaagggatcacctcataa
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