Paenibacillus tundrae: V6W81_20615
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Entry
V6W81_20615 CDS
T11276
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ptun Paenibacillus tundrae
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_20615 (addB)
Enzymes [BR:
ptun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6W81_20615 (addB)
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V6W81_20615 (addB)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
WWM59929
LinkDB
All DBs
Position
complement(4587602..4591105)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSVRFVIGRAGSGKSALVTREITTLLQQEPQGNPLILLVPEQSSFRTEQALVSSGMIKGS
MRAEVLGFRRLAYRVMQEAGGSARIPIGAEGKKMLLYKVLQRRKEELKLFGASSSQLGFI
SHLNNLYGEFKRYELDPASLGDGVSMWNASSSAPILGDKLHDLLLIYRDYEQELTDLYID
DEDTLSELTERLSEGTMLKDSQIWIDGFQGFTPQELSVIGRLMLQSSNVTIALTLDRPYE
HGALPNDLDLFYPTASAYARLKGMADDLGVPSETMILQPGVAPRYEGSPGLAHLEAGFDR
RVRWRSEGRDSGIKLYAAENRRAELEGALREMRRLAQDEGARYREMAVLVRQLDAYADIA
EPLFRDYNIPVFLDRRRSELHHPLAEFIRSALDVVRRRWRYEDVFRCVKTDLLLPRDGSV
SREDMDQLENYILACGIHGYRWTDGKPWKYVPSLSLEDNGQENRSRGREQMLSLMEKCRT
VITDPMGAFEKRMSKAKTAKEQCAALYNLLEDAEIPWKLEAMSTEATAQGDPERSREHRQ
MWGAVLDLLDQMVDMMGAERLDLDLFAGLIETGLTELKLGLVPPALDQVLVGSMDRTRLQ
DIKYVFILGAVDGELPAVPQEDGVLTEQERLLLTERGLPLGPGATRQMLDERFLIYTALT
SASDQLWLSYPVADDEGKSLLPSEIVRHVRNMFGKQEQPLLTEPQGSVALQNHWAYVRHP
EQSLSTLIGQLRRWRRGEDIPELWWAVYNWHASQESSKPLLDRLLGSVFYRNRALPLRTS
TSRRLYGTEVRTSVSRMERFVACPFSHFASHGLRLKDRQLYRLQAPDIGQLFHAALSQLA
MRLREENRSWGSLSPEQCRQEAEQTVEQIAPQLQGEILLSTKRYGYIFRKLKEIVSRASV
ILGEQSRRGSYEPIGLELDFGPGKPLPPLRFELENGCVMEIVGRIDRVDVAEGENGLLLR
VIDYKSSQTDLKLHEVYYGLSLQMLTYLEVLLSAAEEWLGESAMPGGTLYFHVHNPLLQS
SNGMTSEQAGQELLKRFKMKGLLLADRDNIAQMDHTLEKGYSAIIPVALKADGSFYSSAA
VATPEQWDTLLATVRSNIREIGTRITDGDVGIEPYRIQQEVACTFCPYKPVCQFDENIEG
NEYNLLSRPGKQQIWELLSHNKGGETL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgcttcgttattggccgggcaggcagtggcaagagtgccctggttacccgg
gaaattactaccctgcttcaacaggagccacaggggaatccccttattttactagtacct
gaacagagttcattccgtacagagcaagcactcgtctcttctggcatgatcaaaggatct
atgcgcgctgaagtgcttggtttccgaagactagcttaccgtgtcatgcaggaggctggt
ggttcggcgcgtattccaatcggtgctgaaggtaagaagatgctgctctataaagtactg
caacggcgtaaggaagagttgaaattatttggtgcttcaagcagtcaattaggctttatt
agtcatctgaacaacctatatggtgaatttaaacgttatgagcttgatcctgcatcgctg
ggagacggagtttccatgtggaatgcctcttcgtcagcaccgatattgggagataagctt
catgatctgcttttaatatatcgtgattatgaacaggaattaacggatctctacattgat
gatgaagatacgctcagcgaattgactgaacggttatctgaaggcacgatgctgaaagat
tctcagatttggatagatgggtttcagggatttactccacaggaactgagtgtgattgga
agactgatgttgcagtcttctaatgttacgattgcattgacgttagatcgcccatacgag
catggtgcacttcctaacgatttggatctgttctatcccacagcgagtgcttatgcacgt
ctcaaaggcatggctgatgacttaggtgtgccgagcgaaacgatgattcttcagccaggg
gttgcgccaagatatgaaggaagcccgggattagcgcatttggaagcggggttcgatcgt
agagttcgctggagaagtgaagggcgtgattctggtattaagttgtatgcagccgagaac
cgtcgtgcggaactggaaggtgcgctacgggaaatgagacgtttggctcaagatgagggt
gcgcgttaccgtgagatggctgtgttggttcgtcagttagatgcttatgcagatattgcc
gagccgttgttccgagattataacatccctgtcttcttggatcgcagacgaagtgagctg
catcatccgctcgcggagtttattcgttcagcactggatgttgttcgtcgtcgctggcgt
tacgaagatgtgtttcgttgtgtcaaaacagatctcctcctgcctcgggatggttcagtg
agccgtgaggacatggatcaactcgagaattacatcctagcttgtggtattcacggatac
cgctggacagacggcaaaccttggaagtatgtgcctagcttgtcgctggaggacaacggt
caggaaaatcggagccgtggacgtgaacaaatgttatcgttgatggaaaagtgccgcacg
gttattacagatccaatgggtgcttttgagaagcgaatgagcaaggcaaagacagccaag
gaacagtgtgctgcattatacaatttacttgaagatgcggagattccatggaagctggag
gcgatgtccaccgaggccaccgctcaaggtgatccggaacgttcacgcgagcatcgacaa
atgtggggagccgttctagatctgcttgatcagatggtcgatatgatgggagccgagcgt
ctggacttggatttgtttgctggattaattgagacaggactaacggagcttaaattgggt
ctggttccacctgcattagatcaggtattggttggttcgatggatcggacgcgtctgcaa
gatatcaagtatgtatttattcttggagcagtggatggagaactcccggctgtacctcaa
gaggatggtgtattgactgagcaggaacgacttttgttaacagaaagaggtttgcctctg
gggcctggagcgaccagacaaatgctggacgagcgttttctgatatataccgccttaaca
tcagctagtgaccaactgtggctaagttaccctgtcgcggatgatgaagggaagtcgctg
ctaccttcggagattgtaagacatgtgcggaacatgtttggtaaacaggagcagcctctt
ctgactgaacctcagggatcagtcgctttacagaatcattgggcctatgttcgtcatccg
gaacagagcttatctacgttaattggacaattgcgcagatggcgccgcggtgaggacatt
ccagaattatggtgggccgtgtataactggcatgcttcgcaagaaagcagcaaaccgcta
ttggaccgattactgggatccgtcttttatcgtaaccgggcgttaccacttcgcacatcc
actagtcggagattgtacggtacggaagttcgcacaagtgtctcccggatggaacggttt
gtagcatgcccattctctcactttgcttctcatggattacgcttgaaggatcgccagctt
taccgtcttcaagcaccagatatcggtcaattatttcatgctgcactcagtcagttggcg
atgcgcttgcgtgaagaaaatcgtagctgggggagtttatcgccagagcaatgccgacaa
gaggcagagcagacggtggagcagattgctccacagcttcaaggagaaattttgcttagc
accaaacggtatggttacattttccgcaagttgaaggagattgtcagcagagcttccgtt
attctgggagaacagtctagacgaggaagttatgaaccgatcgggcttgagcttgatttt
ggaccaggcaagcctttgccgccgttacgttttgaactggaaaatggttgtgtgatggag
attgtcggtcgaattgaccgcgtagatgttgctgaaggggaaaatggacttctactacga
gtcatagactataagtcaagtcagacggatctcaagctacacgaagtgtattatggtctg
tcactacagatgcttacgtatctggaagtgttacttagtgcggctgaagaatggttgggt
gaatctgccatgccgggcggcacgctgtatttccatgtgcataatccgctactgcaatct
tccaatggcatgacctcggagcaagcaggacaagagctgctgaaacgcttcaaaatgaaa
ggactattgctcgcagaccgagataacattgctcaaatggatcataccttggaaaaaggg
tattctgcgattattcctgttgcactgaaagcagatggtagtttttacagcagtgcagct
gtagctacacctgagcaatgggacacattgcttgcaaccgtacgaagcaacattcgagag
attggtacacggattacggacggggacgtgggcatcgagccttatcgtatccaacaggaa
gttgcatgtaccttctgtccgtataagccagtctgtcagtttgatgagaatatagaaggt
aatgaatataatctgttatcaagaccaggcaaacagcaaatatgggagttgttatctcac
aacaagggaggggaaacgttatga
DBGET
integrated database retrieval system
