Paenibacillus tundrae: V6W81_20725
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Entry
V6W81_20725 CDS
T11276
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun03030
DNA replication
ptun03430
Mismatch repair
ptun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6W81_20725 (holA)
03430 Mismatch repair
V6W81_20725 (holA)
03440 Homologous recombination
V6W81_20725 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptun03032
]
V6W81_20725 (holA)
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_20725 (holA)
Enzymes [BR:
ptun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6W81_20725 (holA)
DNA replication proteins [BR:
ptun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6W81_20725 (holA)
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6W81_20725 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Sigma70_r4_2
YdfE_C
Motif
Other DBs
NCBI-ProteinID:
WWM59951
LinkDB
All DBs
Position
complement(4613011..4614027)
Genome browser
AA seq
338 aa
AA seq
DB search
MDVKSATKAIRSGDTAPIYVLYGTEKYQIQQFTDMLKEQVIEEEHRDFAIVPYDLSETPV
EVVIEEAETVPFLVPRKLIIVRDANLFTAGKDSKIEHQVDRLLTYMDNPADYSTIVFLAQ
GDKLDERKKLVKAAKKQAIVLSFAPLSGEELLNWIVKLAKQREVTFEPGAPDILVSYAGT
GLQTLSAEVDKLCLFAGNGGMIRRADIESLVARSTEQNVFALVEELANLRLEKALSLFYE
LLKQREEPIKIAALIARQFRIMIQVKELGQQSYSQQQIASQLGLHPYAVKIAGEQARKFQ
PERLRLILSHLSELDYQMKTGAVDKVLGLELFLLKLGA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagagtgcaacaaaagcaatacgaagtggggatacggctccgatatatgtg
ctgtacggaacggagaaataccagatacagcaatttacggatatgttgaaggaacaggtt
attgaggaggagcatcgagattttgcgattgtaccttatgatctctcggagacgcctgta
gaagttgttatcgaagaagcggagacagttcctttccttgtgccgcgtaaactaattatt
gttagagatgcgaatctgtttacagccggtaaggattccaaaattgaacatcaggttgat
cgcttgctgacatacatggataaccctgcggattacagtacaatcgtatttttagcccaa
ggagataagctggacgagcgcaaaaagttagttaaggctgcgaagaagcaagccattgtg
ctttcgtttgctccacttagtggggaagagttgttgaactggattgtgaagctggctaaa
caacgtgaggttacctttgagcctggagctccagatattctcgttagttatgcgggaaca
ggtctacagacgttatctgctgaagtagacaagctctgcctttttgctggaaacggtggc
atgattagacgtgcggatatcgaatcgttagttgcgcgtagcacggagcagaatgtattt
gctctagtagaggaattggcgaatctaaggcttgagaaggcgttatccctattctatgag
ttgttgaaacagcgcgaagagcctatcaaaattgcggcattgatcgctagacagttccga
atcatgattcaagtgaaggagcttgggcaacagagctattcacagcagcagattgcaagc
cagcttggactccacccctatgcagtcaaaattgctggggagcaggcacgtaaatttcaa
cctgaacgtttacgactgattttaagccatctgagtgagctggattatcaaatgaaaaca
ggtgctgtagacaaagtgcttggtctggagttatttttgttaaaacttggtgcctaa
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