Paenibacillus tundrae: V6W81_23615
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Entry
V6W81_23615 CDS
T11276
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun00020
Citrate cycle (TCA cycle)
ptun00190
Oxidative phosphorylation
ptun00650
Butanoate metabolism
ptun00720
Other carbon fixation pathways
ptun01100
Metabolic pathways
ptun01110
Biosynthesis of secondary metabolites
ptun01120
Microbial metabolism in diverse environments
ptun01200
Carbon metabolism
Module
ptun_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptun_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V6W81_23615 (sdhA)
00650 Butanoate metabolism
V6W81_23615 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
V6W81_23615 (sdhA)
00720 Other carbon fixation pathways
V6W81_23615 (sdhA)
Enzymes [BR:
ptun01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
V6W81_23615 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
FAD_oxidored
FAD_binding_3
NAD_binding_8
DAO
AlaDh_PNT_C
Thi4
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WWM60487
LinkDB
All DBs
Position
complement(5258176..5259918)
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AA seq
580 aa
AA seq
DB search
MASSNVIIVGGGLAGLMAAIKSAEAGVHVHLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWVHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTK
HHRTAFAGATTGQQLLYALDEQVRRWEAAGLVTKYENWEFLQAVVDDEGVCRGIVAQDLK
TMKVQTFPAEAVILASGGPGIIFGKTTNSVINTGTAASAVYQQGVNYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPSYGNLVPRDIATREIFSVCVDMG
LGVNGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNIPGLFAAGECEYQYHGANRLGANSLVSAIYGGMVAGPKAAEYIKGLKKSSADI
SSSVFDNYTKQQTNKYEGIMKMQGNENAYVIHKELGEWMTANMTVVRYNDKLEATIGKIK
ELKERYGKINMYDTSGWNNPGAAFTRQLWNMLELAEAMTLGALLRNESRGAHYKPEFTER
NDEEFLKTTIASWSKEGPQISYEPVDVSLIPPRIRDYSKD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatctaatgtaattattgtgggcggcggtctcgcaggtttgatggcggcgatc
aaatcggctgaagccggagttcatgttcatttattttcactagtaccagttaaaagatct
cactccgtatgtgcccaaggcggtatcaacggtgcggtaaataccaagggtgagggagat
tctccttgggtccactttgacgatacggtatatggcggcgacttcctcgcgaaccagcca
ccagttaaggcgatgtgtgaagcagcgccaggcatcatccacttgatggacagaatgggc
gttatgtttaaccggacaccggaaggtttgcttgatttccgtcgtttcggaggtacgaag
catcaccgtacagcattcgcaggagcaacgacaggacaacagttgctgtatgctctagac
gagcaggtgcgtcgctgggaagcagcggggctagttacgaagtatgagaactgggaattc
ctacaggctgttgtcgatgatgaaggtgtgtgccgaggcattgtagcacaagacctgaaa
acgatgaaggttcagaccttcccggccgaagcagttattcttgcgagcggtggcccaggt
atcattttcggaaaaacaactaactccgtaattaacacaggtacagcggcaagtgccgtg
tatcaacaaggtgtaaattacgcaaacggtgagttcattcagattcacccaacggctatt
ccgggtgatgacaagcttcgtcttatgtcagaatctgcacgtggtgaaggtggacggatc
tggacatataaagacggtaagccatggtacttccttgaagagaagtatccatcctatggt
aaccttgtaccgcgtgacatcgcgactcgtgaaatcttcagcgtctgcgtagatatgggt
cttggggtcaatggcgagaacatggtatacctcgatctgtcccacaaagatcctaaagag
ctggatgtgaagctcggtggaattatcgagatctatgagaagttcatgggtgacgatcca
cgtaaaatccctatgaaaatcttcccggcagtccactattccatgggcggtatgtgggta
gattacaaccaaatgactaacattccgggactgtttgcagcaggtgagtgtgagtatcaa
taccacggagcgaaccgacttggtgcaaactctctggtgtcggccatttacggcggtatg
gtcgctggaccaaaagcggctgaatatatcaaaggactcaaaaaatcgtctgctgatatt
tcttcctccgtcttcgataactatacgaaacaacaaacgaataaatacgaaggcatcatg
aagatgcaaggtaatgagaatgcttacgttattcataaagagcttggcgagtggatgaca
gccaacatgacggttgtgcgttacaatgacaagcttgaagcaaccattggcaagatcaag
gaattgaaagaacgttatggcaaaatcaacatgtatgacacttcaggttggaataaccct
ggtgcggcatttacccgccagttgtggaacatgcttgaattggctgaagccatgacgctg
ggcgcattgttgcgtaacgaaagccgcggcgcgcattacaaacctgagtttacggaacgt
aacgatgaggagttcctcaaaacgaccatcgcaagctggtcgaaggaaggtccacaaatc
tcgtacgagccagtagacgtttccctgatcccaccacggatccgtgactactccaaagat
taa
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