Paenibacillus tundrae: V6W81_23970
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Entry
V6W81_23970 CDS
T11276
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V6W81_23970 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptun01007
]
V6W81_23970 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptun03016
]
V6W81_23970 (trpS)
Enzymes [BR:
ptun01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
V6W81_23970 (trpS)
Amino acid related enzymes [BR:
ptun01007
]
Aminoacyl-tRNA synthetase
Class I (G)
V6W81_23970 (trpS)
Transfer RNA biogenesis [BR:
ptun03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
V6W81_23970 (trpS)
Prokaryotic type
V6W81_23970 (trpS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WWM60549
LinkDB
All DBs
Position
complement(5345960..5346952)
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AA seq
330 aa
AA seq
DB search
MKTVLSGIQPSGKLTLGNYIGAIKNFVKLQHDYQCHFMVVDLHAVTVAQEPAALREQSEA
VAALFIAAGIDPTKSNVFLQSHVPQHAELGWLMTTLTSMGELERMTQFKDKSSGKDSVGA
GLFVYPSLMAADILLYNADLVPVGEDQKQHLELTRDLAGRFNHRYGEYFTIPDPYIPQVG
ARVMSLDDASSKMSKSNPNAGSYIALLDTPAEIRKKISRATTDSGREVVYDPANKPEVSN
LMSIYAECAGMTLQQVADQYEGQMYGPFKKGLAEAVVSVIEPLQQRYHEIRESGELADIL
DASARRAEEVASKTLNDVKERMGFVPRRAR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtattatctggaattcagccgagtggtaaacttacgcttggtaactacatt
ggtgcgatcaaaaattttgtgaagctgcagcatgattatcaatgtcacttcatggtggtg
gatcttcatgccgtcactgtagctcaggaacctgctgcacttcgtgagcaatccgaggcg
gtagctgccctgtttattgcagctggcatcgatccgaccaagtccaacgtatttttgcag
tcccatgtgcctcagcacgctgagttgggatggttaatgacaacactcacttctatgggt
gagcttgagcgtatgactcagttcaaagacaagtcttcaggaaaggattccgttggggca
gggctgtttgtatatccatctctgatggcggctgacattctattatacaatgctgatctc
gttcccgtaggtgaggatcagaagcagcatttggagctcacgcgtgatctcgcgggtcgc
ttcaatcaccgttatggggagtatttcacaattccagatccgtacattccgcaagtgggt
gcgcgtgtgatgtcattggatgatgcttcctccaaaatgagtaaaagtaatccgaatgca
ggcagctatattgcgttgctcgacacgccggcagaaattcgcaagaaaatcagtcgtgcc
acaacagattcaggacgtgaagtcgtgtacgatccggctaacaaaccggaagtgagcaat
ctcatgagtatctacgcggaatgtgcaggcatgactcttcaacaggttgctgatcagtat
gagggccagatgtatggtccattcaaaaagggattggcagaggctgtcgtttccgtcatt
gagccgttgcaacaacggtatcatgagatccgtgaatcaggcgaattggctgatattctc
gatgcttccgctcgtcgtgcagaagaagtggcttccaaaacacttaatgatgttaaagaa
cgtatgggctttgtaccaagacgtgcacggtag
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