Paenibacillus tundrae: V6W81_24095
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Entry
V6W81_24095 CDS
T11276
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
ptun Paenibacillus tundrae
Pathway
ptun02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6W81_24095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptun02000
]
V6W81_24095
01504 Antimicrobial resistance genes [BR:
ptun01504
]
V6W81_24095
Transporters [BR:
ptun02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
V6W81_24095
Antimicrobial resistance genes [BR:
ptun01504
]
Gene variants
Macrolide resistance genes
Transporters
V6W81_24095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
KAP_NTPase
AAA_22
RsgA_GTPase
AAA_24
AAA_23
Dynamin_N
ABC_tran_Xtn
ATP-synt_ab
AAA_15
Leu_zip
Motif
Other DBs
NCBI-ProteinID:
WWM60574
LinkDB
All DBs
Position
5368462..5369940
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINVTNLTFAYDGSYDNIFEHVSFQLDTDWKLGFTGRNGRGKTTFLQLLLGKYEYSGQ
ISAQVDFEYFPFQVKDKSMMTLDVVEDIYPEYLHWQLARELNLLKVSEDILYRPFDSLSQ
GEQTKVMLAALFLKDNQFLLIDEPTNHLDLHARKIVSEYLRNKSGFILVSHDRSFLDHCV
DHILSINKTNIEIQKGNFSAWWENKRRQDQFELASNEKLMKDIKRLSDSAKRTGGWSHEV
EKSKNGTRNSGSKVDKGYIGHKAAKMMKRSKNIEQRQQSAIQEKSKLLKNLESAERLQIH
QLDFHKNELVELENVTITYDSNPVCTDVSFTIERGDRIALYGKNGSGKSSLLKLIYGEDI
PYTGLCRKDPQLKISYVSQDTSDLSGNLSEYAFNQGIDESLFKSILRKLDFSRLQLEKDI
SSFSAGQKKKVLIAKSLSEQAHLHIWDEPLNFVDVISRMQIEDLLLEFEPTLLFVEHDSE
FCANIATKIINL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaattaatgttactaaccttaccttcgcctatgatggcagttacgataatata
tttgaacatgtaagctttcagctagacaccgattggaaattaggatttaccggcaggaac
gggagaggcaaaacaacttttctgcaattgctgcttggtaaatatgagtacagtggacag
atctcagcgcaggttgactttgaatacttccctttccaagtaaaggataagagcatgatg
acccttgatgtcgtcgaggacatttatcctgagtatctacattggcagctcgcgcgtgag
cttaacctgttgaaagtatcggaagatattctatatcggcctttcgattccttatctcag
ggggaacagaccaaagtcatgcttgcagccttgttcctgaaggataatcaatttctgctt
atcgatgagcccactaatcatctggatctgcatgcgcggaaaatcgtgagtgagtatctt
cgcaataaaagtgggtttatcttggtatctcacgatcgatcttttctggatcactgtgta
gatcatatcctgtccatcaacaagacgaacatcgagattcaaaaggggaatttctccgcc
tggtgggagaacaaaagaagacaagatcagttcgaactcgccagtaatgagaaactaatg
aaggatatcaagcgtttatccgactcagccaaacggacgggtggatggtcgcatgaagtg
gaaaagagcaagaatggtaccagaaattccggttccaaagtagataaaggatatatcgga
cacaaggctgccaaaatgatgaaacgttccaaaaacatcgaacagagacagcaatctgcc
atccaagaaaagtctaaactactcaagaatctggaaagcgcagaacgattacagattcat
cagctcgattttcacaagaatgaactggtcgaattagagaatgtaacgatcacatatgac
tctaaccccgtgtgtaccgatgtaagctttacgattgaaagaggagatcgcattgccctt
tacggaaaaaatggatcgggtaaatcaagcctgcttaaattgatctatggtgaagatatt
ccgtatacaggtctttgtcgcaaagatcctcagctcaaaatttcctatgtgtcgcaggat
acatccgatctcagtggcaatttatctgagtatgcgtttaatcaaggaattgatgagagc
ctgtttaaatccattctgagaaaactcgatttttccagactacaattggagaaggatatt
tctagctttagcgccgggcagaaaaagaaagtactcattgccaaaagtctaagtgagcaa
gcgcacctgcatatctgggatgaaccactcaacttcgtggatgttatatcgcgtatgcaa
attgaagatttgctgttggagtttgagccaacgcttctctttgtcgagcacgacagtgag
ttctgcgccaatattgcaacgaaaatcattaatctatga
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