Paenibacillus tundrae: V6W81_25490
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Entry
V6W81_25490 CDS
T11276
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ptun Paenibacillus tundrae
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptun03016
]
V6W81_25490 (truA)
Enzymes [BR:
ptun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
V6W81_25490 (truA)
Transfer RNA biogenesis [BR:
ptun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6W81_25490 (truA)
Prokaryotic type
V6W81_25490 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WWM64432
LinkDB
All DBs
Position
complement(5665073..5665846)
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AA seq
257 aa
AA seq
DB search
MRNLCMTVTYDGTAYYGFQVQPGGNTIQDHLEDAIRALTGETVKITGSGRTDAGVHARRQ
IFNFPTASQIPIERWCIALNSRLPSDIVVIDALEVPADFHSRYAAKKKTYRYTVNANQFP
DVFNRRLQYHHHAKLDTAAMEEGLRHFIGTYDFTSFASRKSQKENHVRSVYEAWMEVDRS
MCRDHPRDQGVIHIYVSGNGFLQHMVRIIVGTLLEIGEGKRKASDVPNMIAACNRSAAGP
TAVSCGLMLWDLEYKKD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttatgtatgacggtaacttacgatggaacagcctattacggctttcaagta
cagccgggaggtaataccattcaggaccatcttgaagatgctattcgtgcattaaccggt
gagacagttaaaattacgggttcaggccgaacggatgcaggcgttcacgcccgcagacaa
atcttcaattttcctacagcgtcacagattccaattgagcgttggtgtattgcactcaac
tccagattaccatcggatattgtcgttattgatgcattggaagtgccagcggattttcat
tctcgctatgcagcgaaaaagaaaacgtatcggtacactgttaatgcgaatcaatttccg
gatgttttcaacagacgactgcaatatcatcaccatgccaaactggacactgcggccatg
gaggagggactgcgtcactttataggtacgtatgatttcacttcctttgcttcacgcaag
tctcagaaagagaatcatgtacgttcggtatacgaagcatggatggaagtagaccgttca
atgtgtagggatcatccgcgcgatcagggtgtcattcacatttatgtgagtggtaacggc
tttttgcagcatatggttcgtatcattgtaggtacactgctggagatcggagagggcaaa
cggaaagcctctgatgtaccgaatatgattgctgcatgtaatcgatctgctgcaggacca
actgcagttagctgtggtttaatgctctgggatcttgaatacaaaaaagattaa
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