Paenibacillus tundrae: V6W81_25910
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Entry
V6W81_25910 CDS
T11276
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ptun Paenibacillus tundrae
Pathway
ptun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V6W81_25910 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptun03400
]
V6W81_25910 (uvrA)
DNA repair and recombination proteins [BR:
ptun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6W81_25910 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V6W81_25910 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
nSTAND3
AAA_25
AAA_33
DnaJ_CXXCXGXG
AAA_23
nSTAND6
ATPase_2
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
WWM60891
LinkDB
All DBs
Position
complement(5747720..5750578)
Genome browser
AA seq
952 aa
AA seq
DB search
MASENIVIKGARAHNLKNIDITIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGVEITSQTVEQMVDRVMQYPERTRLQILAPIISGRKGEHKSVFADISKQGFVRVR
VNGEMRELSEDIQLEKNKKHTIEVVVDRVVIKEDVQSRLADSIETALNLSGGQLLVDIIG
EEELRFSSNFACPVCGFSIEELAPRMFSFNSPFGACPECDGLGVKMIVDPDLLVPDRSKT
IEEGAFDAWTGGTSTYYPQFLKSVCEHFNIPQDVPVEDLPADQMNKLLLGTGTEKIRFRY
ENDFGQRKEALVTFEGIVNNLERRYRETASEGIREFIEGYMSAKPCGKCKGHRLKRESLA
VTINDHNMAYVTSLSIGEAGKFFETLQLSEKERAIANLILKEINSRLGFLVNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDIGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGTVMSQGTPEEIMNDENSLTGQYLSGRKFIPI
RAERRSVGDRWLEVRGAKENNLKNLNVKIPVGVFTAVTGVSGSGKSTLINEILYKTLARD
LNRARVRPGQHKEIRGLEHIDKVIDIDQSPIGRTPRSNAATYTGVFDDIRDLFAQTNEAK
MRGYKKGRFSFNIKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKS
KNIADVLEMTVEDATQFFENIPKIHRKMQTLLDVGLGYINLGQPATTLSGGEAQRVKLAS
ELYRRSTGKTIYILDEPTTGLHVDDIDRLLNVLHRLVDSGETVLVIEHNLDVIKTADYIV
DLGPEGGSGGGTIVATGTPEDIIEVEASYTGKYLKPVLVRDTERSKMLQLTE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
ttggctagcgagaatattgtcatcaaaggtgcacgtgcacacaacctaaagaacattgat
attaccattccgcgtgaccgttttgttgtattgacgggtctgagcggctcaggcaagtcc
tcgctggcttttgatacgatctatgcagaaggtcagcggcgatatgtagagtcattatcc
gcttatgcacggcagtttctaggacaaatggagaaaccggatgtggattccattgaaggt
ctctctccagcgatctcaattgaccagaaaacgactagccgtaatccacgttcaaccgtg
ggaacggtaaccgagatttatgactatttacgtctattatttgcacgtgtaggacatccc
cactgcccggatcacggtgtagaaattacatcgcagacggtagagcagatggtcgatcgt
gtcatgcagtatccggaaagaactcgattgcagattttggcaccgattatctctggacgc
aaaggcgagcataagagtgtatttgccgatatatccaaacaaggatttgtccgtgtgcgt
gtaaatggtgagatgcgtgaactgtctgaagatatccagttggagaaaaataagaaacac
acgattgaagttgtcgttgaccgggttgtcatcaaggaggatgtccagtcacgtcttgca
gactccattgaaacggcactgaatctgtccggtggacaattgctcgttgatatcatcgga
gaggaagaactccgtttcagttctaattttgcatgtccggtgtgtggattcagcattgaa
gagctcgcgccgcgaatgttctctttcaacagcccctttggagcttgccctgaatgtgat
ggacttggtgtgaaaatgatcgttgacccggatctgctagtacctgaccggagtaaaacg
attgaagagggcgcatttgatgcttggacaggaggaacgtcaacgtactatcctcagttc
ttgaaatcagtatgtgaacacttcaacatcccgcaggatgtacctgttgaagatcttcca
gccgatcagatgaacaagttgctgctgggtacaggtacagagaaaatccgtttccgttat
gagaacgattttggacaacgcaaagaagcactggtgacctttgagggtatcgtgaacaat
ttggagcgccgttatcgtgaaactgcatctgagggcatccgtgaatttattgaaggttat
atgagcgccaagccttgtggtaaatgtaaaggacatcgtttgaaacgtgaaagtcttgca
gtcacaatcaatgaccataacatggcatatgtaacgagcctttccattggagaagcggga
aaattcttcgaaacattgcagcttagtgagaaggaacgtgctatcgcgaatctgattctc
aaagaaattaacagccgtctgggcttcctcgttaatgtcggtctggattacctgactttg
agccgtgctgctggaacgttatctggcggtgaagcgcagcggatcagattggcgacacag
attggttctagcctgatgggtgtgctctatattctagatgagccaagtatcggtctgcat
caacgggataatgatcgtttgatcagtacgctggctcacatgagagacatcgggaatacg
ttaatcgtagttgagcatgatgaagatacgatgatggcagccgactatattattgatatt
ggccctggcgcgggtatccacggaggtaccgtaatgtcacagggtacaccagaagagatc
atgaatgacgagaactcgttaacgggtcaatacctcagtggacggaagttcattccgata
cgtgcggaacgccgcagcgtaggtgatcgttggttggaagtacgcggcgccaaagaaaat
aacctgaagaacctgaatgtaaaaatcccagttggtgtattcaccgctgtaacgggtgta
tctggatcagggaaatcgacattgattaatgaaattttgtacaaaacattggcgcgtgat
ctgaatcgtgctcgtgtacgtcctggacaacataaagagatccgtggtctggaacatatc
gataaagtcatcgatattgaccagtcgccaatcggtcgtacaccgcgatccaatgcggct
acgtataccggagtgttcgatgacattcgggatttgtttgcgcaaacgaacgaagctaag
atgcgtggatacaaaaagggtcgtttcagtttcaacatcaaaggcgggcgttgtgaagct
tgccggggtgatggaattatcaagattgagatgcacttcttgcccgacgtatacgttcct
tgtgaagtctgcaagggcaaacgttataaccgtgagacgctcgaagtgaagtacaaatcc
aaaaacatcgctgatgtacttgaaatgacggttgaggatgcaacacaattcttcgagaac
attccgaaaatccatcgcaaaatgcagacactgcttgatgtaggtttgggttatatcaat
ttaggacaaccggcaacaaccttgtccggtggtgaagctcaacgtgtgaagcttgcctct
gagctgtatcgtcgcagtacaggcaagaccatttatattctggacgagccaacgacagga
ctgcatgtcgatgatatcgatcggttgctaaacgtattgcaccgtttagttgattcaggt
gagaccgtgctggttatcgagcacaatctggatgtaatcaaaacagccgactatattgtt
gatctgggcccagaaggcggtagtggcggcggaacgatcgtggcaaccggaacaccagag
gatattatagaagtagaggcatcttatacgggtaagtacctgaaaccagtcttggtgagg
gatacagagcgaagcaagatgcttcagttaacggaataa
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