Paenibacillus tundrae: V6W81_26430
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Entry
V6W81_26430 CDS
T11276
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun00260
Glycine, serine and threonine metabolism
ptun00460
Cyanoamino acid metabolism
ptun00630
Glyoxylate and dicarboxylate metabolism
ptun00670
One carbon pool by folate
ptun00680
Methane metabolism
ptun01100
Metabolic pathways
ptun01110
Biosynthesis of secondary metabolites
ptun01120
Microbial metabolism in diverse environments
ptun01200
Carbon metabolism
ptun01230
Biosynthesis of amino acids
ptun01240
Biosynthesis of cofactors
ptun04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V6W81_26430 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V6W81_26430 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6W81_26430 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V6W81_26430 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V6W81_26430 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V6W81_26430 (glyA)
Enzymes [BR:
ptun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V6W81_26430 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WWM60992
LinkDB
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Position
complement(5884496..5885743)
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AA seq
415 aa
AA seq
DB search
MEQLRKNDPAVLEAMNLELKRQQNNIELIASENIVSEAVIEALGSVLTNKYAEGYPGKRY
YGGCEHVDIVEDIARDRAKELFGAEHVNVQPHSGAQANMAVYLAALKPGDTVLGMNLAHG
GHLTHGSPVNASGLLYNFVAYGVQEDTFLIDYDEVRKAAFKHRPRLIVAGASAYPRTIDF
EKLASIANDVGALFMVDMAHIAGLVAAGLHPSPVPHAHFVTTTTHKTLRGPRGGMILCTK
AWAAAIDKAVFPGSQGGPLMHVIASKAVALGEALQPSFKEYAQNVVKNAQVLAETLISEG
LNIVSGGTDNHLMLIDTRSVNITGKEAEHVLDSIGITVNKNAIPFDPTSPFITSGIRIGT
PAATSRGMNEEAMVSIGKIIAKTLKNPKDTATLDQARAEVTALTDQFPLYTDLKY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattgcgtaagaatgacccggcggtattggaagcgatgaatctggagttgaaa
cgtcagcaaaacaacattgagttgattgcatctgagaacattgtaagcgaagcggttatt
gaagcacttggttccgttctgacgaacaaatatgctgaaggatatccaggcaaacgttac
tatggcggttgtgagcacgtagatatcgtggaagatatcgctcgtgatcgcgctaaagaa
ttgtttggagcagagcatgttaacgttcaaccacactctggtgcacaagcgaacatggca
gtttaccttgcggcgcttaagcctggcgatacagtattgggtatgaaccttgcacatggt
ggtcaccttacgcatggtagcccagtaaacgcatctggcttactctacaacttcgtagca
tatggcgtacaagaagatacattcctgatcgattatgatgaagttcgcaaagcagcgttc
aaacaccgtcctcggttgatcgtggcaggggcaagtgcgtatccacgtacaattgatttc
gaaaaattggcttccattgctaatgacgtaggcgcattgttcatggttgacatggctcac
attgctggattggttgctgctggtttgcatccaagcccggttccacatgcacatttcgta
acaacgacaactcacaaaacattgcgtggaccacgcgggggtatgattctgtgtaccaaa
gcttgggctgctgcaattgataaagcggtattccctggttcccaaggtggaccattgatg
cacgttattgcttccaaagcggtagcattgggtgaagcattgcaaccatctttcaaagag
tacgcgcagaatgtagtgaaaaatgcacaggttctggctgaaacgttgatctctgaaggc
ttgaacatcgtatccggtggtacagataaccacttgatgctgatcgatacacgcagtgtg
aacatcacaggtaaagaagctgagcatgtccttgattccatcggaatcactgttaataaa
aatgcaattccatttgacccaacaagcccgttcatcactagcggtatccgtattggtaca
cctgcggcgacttcccgcggtatgaacgaagaggctatggtatcgatcggtaaaatcatt
gcgaaaacgctcaagaaccctaaagatacagcaacacttgatcaagctcgtgcagaagta
acggcactgacagatcaattcccgctctacactgaccttaaatactaa
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