Pseudomonas tussilaginis: QC631_004885
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Entry
QC631_004885 CDS
T11576
Name
(GenBank) DEAD/DEAH box helicase
Organism
ptus Pseudomonas tussilaginis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_assoc
DEAD
WHD_4th_Lhr
WHD_Lhr
Helicase_C
WHD_3rd_Lhr
ResIII
Cas3-like_C_2
AlkZ-like
MarR_2
WHD_DprA
Motif
Other DBs
NCBI-ProteinID:
XDO22662
LinkDB
All DBs
Position
complement(1036956..1041245)
Genome browser
AA seq
1429 aa
AA seq
DB search
MNLPAQNHPELAAFHPAVRAWFQHRFPTVTAAQAQAWPLIRRGQSLLVAAPTGSGKTLTA
FLAILDELFEQGLASGHLPDQTQVVYVSPLKALSNDIQINLQAPLAGINEALVEQGHEPL
AIRTAVRSGDTPQKERNAMRRQAPHILVTTPESLYVLLGSDSGRQGLANVHTVIVDEIHA
LAGNKRGSHLTLSLERLQALCGRPLRRIGLSATQRPVQRVAEFLVGHGRDCAIVDIGHAR
NRDLALEVPPVPLGAVMATDVWDLVYDRLAALAREHRTTLVFVNTRRLAERLTRHLSERL
GAQAVAAHHGSLAKEHRLDAEQRLKRGELQVLVATAALELGIDIGEVDLVCQIGSPGSIA
AFLQRVGRAGHQVEGTPKGRLFALSRDDLIECAALLDSVRRGELDLLQIPRAPLDVLAQQ
IVAEVSCQPWQEQALFDCLRQAMPYAELDPAHYQALLRMLSEGFNGRQGVRSAYVHRDAV
TRSLRGRRGSQLTALTSGGTIPDNADYAVLLEPQGLNIGSVNEDFAVESIAGDIFQLGNT
SYRILRVESGKVRVEDAKGLPPSIPFWLGEAPGRSDELSFAVARLQGEVDRRLSEPRGQM
QDALTWLREQIGLGMDSAEQLLDYLARTRQVLGALPSQQTLIMERFFDESGGTQLIIHSP
FGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSASHSFSLDDVWRYLSSNNAES
ILIQALLDAPLFGVRWRWNAGVALALPRFVGGRKVAPQIQRMKSEDLIAAVFPDQIACLE
NLVGEGQIPDHPLIEQTLDDCLHEAMDCEGWLALLRRIEQGQIRLISRDLSAPSPLASAI
LNARPYTFLDDAPLEERRTQAVLNRRWNETQNSDDLGALDPEAIAAVQAEAWPLPTCSDE
MHEALMSLACISQAEASANSRWQDWLEALQHQGRACRLQLAEGQSLWLARERLVLLRAVF
HRARIIPDLPALPGFEQPLDADAALVELLRARLSGFGPLTTAQIAAPLQLPAADTEQALA
RLEAEGYVMRGYFLSAQSTLQWCERHLLARIHRYTIKRLRREIEPVSLQDLMRFLFDWQH
LSPATRLQGQPALSAALDLLEGFPAAAAAWESDLLPTRLKDYSPRWLDEACRAGKYAWTR
LAPSAATTTLRSTPLVIVPRPRLGLWRALSPPLDSSELSLRAQRAHSALSEHGALFFDEL
VHDAHLLPSELENALQALVAAGLVSADSFAGLRALITPASKRQGRSPRRGRGALFGGMDD
AGRWALLRKTSTADNRDDHLEHIARILLRRYGVICWRLLEREADCLPNWRELLRCYHRLE
ARGEIRGGRFISGLAGEQFALPEAVALMREVRRRPLDADLIAISASDPLNLVGTLLPGNK
VPALSTNRVLYRDGVPVASLLAGALHYEPGVMPAQQGELRDRLIRAPGL
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcccgcccagaatcacccggaactggctgccttccatcccgccgtgcgcgcc
tggttccagcaccgcttcccgacggtgaccgccgctcaagcgcaagcctggccgttgatt
cgccgcggtcagtcattgctggtggcggcgcccacaggctcaggcaaaacgctcactgcg
ttcctggcaatcctcgacgaactgttcgaacaaggcctggccagcggccacctgcccgac
cagacccaggtggtctatgtctcgcccctcaaggcgctgtccaacgacatccagatcaac
ctgcaagcgccgctggcaggcatcaatgaagcgctggtagaacaaggccatgagccattg
gccatccgcaccgcggtgcgcagcggcgataccccgcaaaaggaacgcaacgccatgcgc
cgccaggcgccgcatattctggtgaccacccctgaatcactgtatgtgctgctcggctcc
gactccgggcgccaaggcctggccaacgtgcacacggtgatcgtcgatgaaattcacgcc
ctggccggcaacaaacgcggcagtcacctaacgctcagccttgagcgactgcaagctctg
tgtggccgaccgctgcggcgaattggcctgtcagccacgcaacgaccggtgcaacgggtc
gccgaatttctggtaggccatggccgtgactgtgcgatcgtcgacatcggccatgcccgc
aaccgtgatctggccctggaagtgccgcccgttccgctcggcgccgtgatggctactgat
gtctgggacttggtctacgaccgcctggcagcgctggcccgcgaacaccgcaccactctg
gtgttcgtcaacacccggcgcctggccgagcgtttgactcggcacttgagcgaacgcctg
ggcgctcaggcggtggccgcgcatcatggcagtctggccaaggaacaccgcctggatgcc
gaacagcgtctcaagcgcggtgagttgcaggtgctggtggccaccgccgccctggaactg
gggattgatatcggcgaagtcgatctggtctgccagatcggttcacccggttcgatcgca
gcctttctacagcgagtcggacgtgccgggcaccaagtcgagggcacgcccaaaggtcgt
ctgtttgcgctgtcacgggacgacctgatcgaatgtgcggccctgctcgacagtgtgcgc
cgtggcgaactggacctgctgcagataccccgcgcaccgctggatgtgctggcccagcag
atcgttgccgaagtcagttgccagccctggcaggaacaggcgctgttcgattgcctgcgc
caggccatgccctacgccgagctggacccggcgcactaccaggccctgctgcgcatgctc
agcgagggcttcaatggccgtcagggtgtgcgcagcgcctacgtgcatcgcgatgcagtc
acccgcagtttacgcggacgccgcggcagtcagctgaccgcactaaccagcggcggcacc
attcccgacaacgccgactatgcggtgctgctcgaaccccagggcttgaacatcggcagc
gtcaacgaagactttgccgtggaaagcatcgccggcgacatcttccaattgggcaatacc
tcttatcgcatcctgcgcgtggaaagcggcaaggtgcgtgtcgaggatgccaagggcttg
ccgccgagcattcccttctggctgggcgaagcaccggggcgcagcgatgaattgtcgttc
gcagtcgcccgtctgcaaggcgaagttgatcggcgcttgagcgagcctcgcggccagatg
caggacgcgctcacctggttgcgggagcagattggcctcggtatggacagtgccgaacag
ttgctcgactacctggcccgtacgcgtcaggtcctcggcgccctgccctcgcaacagaca
ctgatcatggaacgtttcttcgatgagtccggcggcacgcaattgatcatccactcaccc
tttggcagccggatcaaccgtgcctggggcctggcactgcgcaagcgcttctgtcgtacc
ttcaattttgaactgcaggcggcagccagcgaagatgccatcgtcctgtccttgtcagcc
agccatagctttagcctggatgatgtgtggcgctacctgtcgagcaataacgccgagtcc
atcctgatccaggccctgctcgatgcaccactgttcggcgttcgttggcgctggaacgcc
ggtgtcgccctggccctgccgcgctttgtcggcgggcgcaaagtggccccacagatccag
cggatgaaaagcgaggacctgatcgccgcagtcttccctgaccagattgcctgcctggaa
aaccttgtcggtgaagggcagatcccggatcacccgctgatcgagcaaaccctcgacgat
tgcctgcacgaagcgatggactgtgagggctggctggccttgctgcggcgcatcgaacaa
ggccagattcgtttgatcagtcgtgacctgtcggccccttcaccgctggcctcggcgata
ctcaatgcgcgcccgtatacctttctcgacgatgcaccgctggaagaacggcgtacccag
gcggtgctcaatcgacgctggaacgagactcagaacagcgatgacctgggggcccttgac
cccgaggccattgctgcagtgcaagcagaggcttggccacttccaacctgtagcgatgaa
atgcacgaagcgctgatgagcctggcctgtatcagccaggccgaagcctcagccaacagc
cgctggcaggactggcttgaggctctgcaacaccaaggccgtgcctgccgtttgcaattg
gctgaaggccagtccctgtggctggcacgtgagcgcctagtgttgctacgtgccgtgttt
caccgggcccggataatcccggacctaccggcgttgccaggctttgagcagcctctggat
gccgacgcagcgttggttgaactgttgcgcgcacgcctgagtggcttcggccccctgacc
accgcgcagatcgccgccccactgcaactgcccgctgctgataccgaacaggcactggct
cgcctggaagctgaaggctatgtcatgcgcggatacttcctcagcgctcagtcgacactg
caatggtgtgaacgtcacctgctggcacgcattcatcgttacaccatcaagcgcctgcgt
cgggagatcgaaccggtcagcctgcaggatctcatgcgctttctgttcgattggcagcat
ctatcgcctgctacccgattgcagggccagccggcattgagcgcggccctggatctgctc
gaaggctttccggcagcagcggcagcctgggaaagcgacctgctaccgacccggctcaag
gattacagcccgcgctggctggatgaagcctgccgcgccggcaaatatgcctggacccgc
ctggcccccagtgccgccaccactacactgcgcagcaccccgctggtcatcgtgccgcgt
cctcgcctcggcctatggcgggcactgagcccccccttggatagcagcgaactgagtctg
cgcgcacaacgggctcacagcgccctgagcgagcacggtgcgctgtttttcgacgaactg
gtgcatgacgctcacctgctacccagtgagctggaaaacgcgttgcaagcgctggtcgcg
gccggcctggtcagcgccgacagcttcgccggcctgcgtgcactgatcaccccggccagt
aaacgtcagggccgtagcccgcgccgtgggcgcggtgcgctgttcggcggcatggacgac
gccggacgctgggccctgctgcgcaaaacctcgacagccgataaccgcgatgatcacctc
gaacacatcgcccgcatcttgctgcgccgttatggcgttatctgctggcgactgctggag
cgcgaggccgactgtttgcccaactggcgcgaactgctgcgttgctaccaccgtctggaa
gcccgtggcgaaatccgtggcgggcgctttatcagcggcctggctggcgaacaattcgcc
ctgccggaagcggtggcgttaatgcgtgaagtgcgccggcgtcccttggacgccgacctg
atcgccattagcgccagcgatccgttgaacttggtcggcaccctgttaccaggcaataaa
gtaccggccctgagcaccaaccgcgtgctctaccgcgatggcgtgcccgtcgccagcctg
cttgccggggcccttcactacgaacccggcgtaatgccggcacagcagggcgaactgcgc
gatcgattgatccgtgcccctgggctttag
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