Pseudomonas tussilaginis: QC631_011125
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Entry
QC631_011125 CDS
T11576
Name
(GenBank) NEL-type E3 ubiquitin ligase domain-containing protein
Organism
ptus Pseudomonas tussilaginis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NEL
ToxA_N
LRR_8
LRR_4
LRR_14
LRR_SKP2
RmuC
Motif
Other DBs
NCBI-ProteinID:
XDO23806
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All DBs
Position
2444129..2449339
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AA seq
1736 aa
AA seq
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MSTSHIPTIPGLHGRFLAERLPDFLKHATPADLKRWREIQRPAQWAPSGSAVWFDQADEY
EQRMLLDLQDRSRLSTQALATALKHLKGVGAFAEPLLKAALKDSGLLRTLEHTVDVNTDT
LVELRYESQLLGSLLRLVPRQQTLMQAALQNFADGTRFEKGSALAPKGGFTFEFTPDSNP
ERPRFQYRYTQKLAIEPERFAALCHELDVGGKYQSHLREVFEHPATADVVRTLSINADKD
HLRLAAQVAFMKGEITESAHTMLTALLNGQRAPHLHGKPVTYQSLSMFDTPLDGVLVFSA
DRISSDRVEPIIAYLPGAPLYPLKEYASVAEFKKDLRINLLNPAYLTLFRDYVPKHEQAH
FFSRVNEALYVGAFNADANLHMRDMQIETELFGYRQDQHLQRLKANARYLAVPSAEVDEA
ARQQRLAYWESIGFNVLNAAAFFIPALGGVMAVVGAAQMIKEVIDGAHAWEAGEREEALA
HFESVGLNIALAAGLGASAHGVAPMQASEQVDSLLRVTLPGGEQRLWKPDLAPYARNFDL
ADITPDDRGLFRFNDETTCIRIDEQVYDVSQGEDGTWSIRHPDDPHAYQPALRHNGEGAW
QAVGEQPLQWTHTQLLRRIGHAADGLSDQELEQAAQVSGVDDDVLRRMHVDHLAVPPLLS
DALRRYQVDQRVTRLIGSLSSGEAAVEGLDLAPELSLELAQWPARVIEVYDEANLYRAPI
RYGAERWPSGRVIRLSVRELYANQLADRVLADLDATEALDLFGLAVEPRQRLAVLRRLIA
ERAVLRRGEIYQVLYEQGRAPRSAEQQRLIRDFPLLTDAVAQEIIGAANADERVQLQAID
GRVPMRLAEEARIYQRQIALSRALQGVQHPSLANLDSDRLTLGLLAELAGWSDTVRIELR
ETSASGRLLASIGQPEGELKVIVRQRGEYLAYDAAGLQLSRDKQLLASLLKALPDRERQA
LNLDIQATQSLHAVLCSLAVQDRAMAARLLGQQPIKPWFRSPLHLADGRVGYPLGGIIGG
DRAINAQLNALFPQVRQAELEAIKRRLLEENQTLGDAVFKLQGEHDRLQQTLDQWVEEAR
PDIFMHASRRTVRAQLIIAWRRIPVRGRPATEVVLSAPDVGSLPVLSARFEHIQSLNIDR
MNLRQLPDGFLRCFPRLERLTLEGNPLGVIPPEVSTLTELRHLDVRETRLTDSDTMFDAL
TPLVRLRSLELQSNRMRSIPDTAVETLARLPALTRLNLRYSRGLSSNGLALLARLPLQDL
DLSNTGQVLDHAGAQTFSRFVHLQRLEMSGNPLGQVPELGNLVQLQHLDLEACHLTAWPD
GLTTLMNLEPNQLRRVILSRNQITQLPDLASTRFGAALRAQTDATLRLNVHYNPLEADSI
ARLDEVGSTFVSETTRPPQPGSTWLQGAGQAQRELWSTMFESRQNAALREMLDRLTLSRE
FQRDAPALRPRVWTMLELASQHTPLREELLAIAEAFPVTCGDAGADAFSDLEIAVLVFQR
SAQATASDRGAELLALYKQLFRRHEVQRLADALALARIVRRRALLDSVELPPLDPLDDID
DALLRREKVDDIEIRLALRQALAGVLDYPEPSNGMLYRNMANLTPKTIKRVNNAVMAADT
VANRHAWMVGENSWQRYLKQRYAPQFEGAAQHWAEGLEYLDYCNGADEVPEALNSDVADV
LRTALDQEPIGPDARPRRLEIGSQGYLKAVDALAGAQKSAETQLLVQLTAAQEAAS
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtctcacattcccactattcccggtctgcatggtcgcttcctggccgaacgg
ctgccagactttctgaaacacgcgacacctgccgacctcaagcgctggcgcgaaatccag
cgtccggcacagtgggcgccgtccggtagcgctgtctggttcgatcaggcagatgagtat
gaacagcgaatgctgctcgatcttcaggaccgtagtcgactgtccactcaagccctggcc
acagccttgaaacacttaaaaggggtgggcgcgtttgccgagcctctgctcaaggcggcg
ttgaaggacagcgggcttttgcgaacgctggagcacaccgtcgacgtcaacaccgacacg
ttggtggagcttcgttacgagtcgcagctgctgggctcattgctgcgacttgtgccgcgc
caacaaacgttgatgcaggctgccctgcagaatttcgccgacggtacgcgatttgagaaa
gggagtgcattggcccccaagggcggttttacctttgagttcacgcctgactccaatccc
gaacgcccgcgttttcaataccggtacactcaaaagctggcgattgagcccgagcgtttt
gccgcgttgtgccacgagctggacgtaggcggaaagtaccagtcccacctgcgtgaggtg
tttgaacaccccgcgactgctgacgtagtgcgcacgctgtccatcaacgccgacaaggac
catttacggctggctgcacaagtggcgttcatgaaaggtgaaatcaccgaatcggcgcat
accatgctcaccgctctgctcaatggtcagcgtgcaccacacctacatggtaagccggtc
acgtatcagtccctgagtatgtttgacacgccgcttgacggcgtgctggtgttcagtgcg
gaccggatcagcagtgaccgtgtggagcccataatcgcctacttgcctggcgcaccgttg
tacccactcaaggagtacgcatcggtggccgaattcaagaaagacttgcgcataaacctg
ctaaaccctgcttacctgacgttgtttcgggactacgtgcccaagcatgagcaggcgcac
ttctttagccgcgtgaacgaggcgttgtacgtgggagcgttcaacgctgatgccaacctg
cacatgcgtgatatgcagatcgaaaccgaattgttcggctatcggcaagaccagcacctg
cagcggctcaaggccaatgcccgctacctggcggtgcccagtgccgaggttgatgaagcg
gccaggcagcagcgcttggcgtactgggagagcattggcttcaatgtgctcaatgctgca
gcgttctttatacctgccttgggtggagtgatggcggtggtgggcgctgcacaaatgatc
aaagaagtgatcgacggtgctcacgcgtgggaggccggggagcgtgaggaagcgttggcc
cattttgagtcggtggggttgaatattgccttggcggctggcctgggggccagcgctcat
ggtgttgcaccgatgcaggcgagcgagcaggtggacagcttgttgcgggtcaccctgcct
ggcggcgaacagcgcttgtggaaacctgatctggcgccctatgcacgcaatttcgacctg
gcagatatcacccccgatgaccgtgggcttttccgcttcaatgacgagacgacctgtatc
cgtatcgacgagcaggtctatgatgtgtcccagggcgaagatggcacgtggtcgatccgt
caccccgacgacccccacgcgtatcagccggccctcaggcataacggcgagggtgcctgg
caggcagtgggtgagcaacccttgcaatggacgcatacccagctgttgaggcgcattggc
catgccgcggatggcttgtcggatcaggaacttgagcaggccgcccaggtcagcggggtt
gatgacgacgtgctgcgccgcatgcatgtcgaccacctcgcggtgccaccattgctcagt
gacgccttgcgtcgttatcaagtcgatcagcgggtaactcggctgatcggtagtttgagc
agcggtgaggccgccgtggaggggctggacttggcgcctgagttgagcctggagttggcg
caatggcctgcgcgggtcattgaggtgtatgacgaagccaacctttaccgagcgcccatt
cgctatggcgcagagcgctggccgagcgggcgggtcattcgtctatcggtccgggaactg
tacgccaatcaactggccgatcgggtgctggcggacctggacgccactgaagccctcgac
ctgttcggtttggcagtcgagccgcgtcaacgtctggccgtattacgacggcttattgca
gagcgtgcggtactgcgccgcggggagatttaccaggttttgtatgagcagggacgcgcg
cctcgcagtgctgaacaacaacgtctgatccgcgatttcccgttgctgaccgatgccgtc
gcacaggagatcattggcgctgccaatgccgatgagcgcgtgcagttgcaggccatcgac
ggccgtgtgccaatgcgcctggccgaagaggcccggatctaccaacgtcagattgcgctg
agccgggccttgcagggcgtgcaacatccgtctttggcaaaccttgacagcgatcgcctg
acgctggggttgttagccgagttggcaggttggagcgacaccgttcggattgaactgcgc
gagacctccgcgtcggggcgtctgcttgccagtattggtcagcccgaaggcgagctgaaa
gtgatcgtgcgtcagcgcggcgagtacctcgcttatgacgctgcgggcttgcaactcagt
agggacaagcaattactcgcctcattgctcaaggctctgcctgaccgtgagcggcaggct
ttgaatctggatatccaggcaacgcaatcgttgcacgccgtgttgtgctcccttgctgta
caagaccgagccatggcggcgaggctgcttggccaacaacccatcaagccctggtttcgt
tcgcccttgcacttggccgatggccgtgtcggctatccactgggcgggatcattgggggt
gacagagccatcaatgcccagctcaacgcgctgttcccacaggtgaggcaagcagagctt
gaagccataaagcgtcgcttgctggaagagaaccaaacattgggcgacgccgtattcaag
ctgcagggcgaacacgatagactccaacaaacccttgaccagtgggtagaggaggcccgt
ccggacatcttcatgcacgcctctcgccgaacggtccgcgcgcagttgatcattgcctgg
cgtcgcatacccgtgcgcggtcgaccggcgaccgaggtggtgttgagtgcaccggatgtc
gggtcgctaccggtgttgtcggcacgttttgaacatatccaaagtctgaacatcgatcgc
atgaatctgcggcagctgcccgacggatttttacgctgtttcccccggcttgagcgcttg
acgttggaaggcaatccgctgggggtgattccgcctgaggtcagtacattgactgaactg
cgccatctggacgtgagggaaacccggcttaccgacagtgacaccatgttcgatgcactg
acgccgctggtgcggctacggtcgttggagttgcaaagcaaccggatgcgcagcatccct
gatacagcggtggaaacgttggccaggttgcctgcactgacccgcctgaacctgcgttat
agtcgggggctgagcagcaatggcctggcgttattggcccgcttaccgctgcaagacctg
gacttgagcaataccgggcaggtgcttgatcacgccggcgcccagaccttctcaaggttt
gtccatttgcagcgtttggagatgagcggcaacccattggggcaggtgcccgagctcggc
aatctggtacagctgcagcatctggacctggaagcgtgccacttgacggcgtggccagac
gggctgaccaccctgatgaacctggaacctaatcaattgcgcagggtcattctgagtcgc
aatcagatcactcaactaccggaccttgccagtacacgttttggcgccgctttacgtgcc
cagacagatgccacgctgcggctgaacgtgcactacaacccgcttgaggccgatagtatc
gcgcggttggatgaagtcggttcaacatttgtgtcggaaacgaccaggccgccacagcct
ggctccacctggctgcagggggccggtcaagcccagcgcgagctgtggagcacgatgttc
gagtcgcgccagaatgccgcactgcgtgagatgttggaccgactgacgctatcccgagag
tttcagcgtgatgcacctgcattgcgcccacgagtatggacaatgcttgaattggcctcg
cagcacacgccgctcagagaggagttgttggcaatcgctgaagcctttccggtcacgtgt
ggcgacgcgggcgccgatgccttcagcgacctggaaattgccgtgctggtgtttcaacgc
agtgcacaggcaaccgcaagtgaccgcggtgcggagttgttggcgctgtacaagcaactg
ttccgccgccatgaagtccagcggttggccgatgccttggcactggcgcgcattgtgcga
cgtcgcgcgttgcttgacagtgttgaactgccccctctggatccgctggatgacatcgac
gatgcgctgttgcgtcgtgaaaaggtcgatgatatcgagattcggctggccttgcgtcag
gcgttggcaggcgtcctggactacccggaaccttccaatggcatgctctaccggaacatg
gccaatctgacgccgaagaccataaagcgtgttaataacgcggtcatggcggcagataca
gtggctaaccgacacgcgtggatggtgggtgaaaacagctggcagcgttacctcaagcag
cgctatgcgccgcagttcgaaggcgctgcgcagcattgggctgaaggtctggagtacctg
gattactgcaatggtgctgacgaagtgcctgaggcgctcaacagcgacgtggcggacgtc
ttgcgtacagcattggatcaggagcccattgggccagacgctaggccacgtcggctcgaa
atcggcagtcaaggttatctaaaagcggtcgacgccctggcaggcgcacaaaaaagcgct
gaaacacagctattggtacagttgacggctgctcaagaggctgcgtcctga
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