Pseudomonas tussilaginis: QC631_019465
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Entry
QC631_019465 CDS
T11576
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptus Pseudomonas tussilaginis
Pathway
ptus03030
DNA replication
ptus03430
Mismatch repair
ptus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC631_019465 (dnaE)
03430 Mismatch repair
QC631_019465 (dnaE)
03440 Homologous recombination
QC631_019465 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptus03032
]
QC631_019465 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptus03400
]
QC631_019465 (dnaE)
Enzymes [BR:
ptus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QC631_019465 (dnaE)
DNA replication proteins [BR:
ptus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QC631_019465 (dnaE)
DNA repair and recombination proteins [BR:
ptus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QC631_019465 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
T2SSK
HROB
Motif
Other DBs
NCBI-ProteinID:
XDO20489
LinkDB
All DBs
Position
complement(4271460..4274981)
Genome browser
AA seq
1173 aa
AA seq
DB search
MSASFVHLRLHTEFSLVDGLVRIKPLAKALASMNMPAVAVTDQSNMCSLVKFYKNAMGSG
IKPICGADLWLANRDPDAPLSRICFLAMDAKGYRNLTELISRGWVEGQRNGLVIIEREWI
APASEGLIALSAAKEGDIGQALLNGNPNEAEALLQDWMAMFPDRFYVEVQRTNRAGDEEY
LHAAVALADKFNAPLVATNDVRFIKQTDYDAHETRVCIGEGRALDDPRRSRNYSDQQYLK
SPEEMAELFSDLPDAVANTVEIAKRCNIQVQLGKHFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
ADAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EMLRDFLKTDEDAKEIWDMALKLEGVCRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKKGLDDLNIDFIPLDDKKTYD
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCASNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRSMKLRLDAPDVNTSDFKFTVNDDGRIVYGLGAI
KGVGEGPVEAIVDARKAGPFKDLFDFCERVDLKRINKRTLDALIRSGALDRLGPYFHDEL
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTADSGHADLFGGLFVEEDADVYANHRAARE
LTLKERLRGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFVTLDDRSGRIEASLFADAFMAAQALLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKVHTDALKGDRLNWLGELFKRHRGACPITMEYTGSDAKAM
LQFGESWRIDPADGLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttcattcgttcatcttcgcctgcacactgaattctccctggtcgatggcctg
gtgcggatcaagccgttggccaaggcattggcctcgatgaacatgccggccgtagcggtc
accgaccagagcaacatgtgctcgctggtcaagttctacaagaacgccatgggttcgggt
atcaagccgatctgtggcgccgacctgtggctggccaaccgcgacccggatgcaccgctg
tcgcgcatctgctttctggccatggacgccaagggttatcgcaaccttacggagttgatc
tcccgcggctgggttgaaggccagcgtaacggtctggtgatcattgaacgtgagtggatt
gcgcccgccagcgaagggctcatcgccctgtcggcagccaaggaaggcgatatcggccag
gccttgctcaacggcaacccgaatgaagctgaagccttgctgcaagactggatggcgatg
ttccccgatcgcttctacgtcgaggtgcaacggaccaaccgcgccggtgatgaagagtac
ctgcacgctgcagtcgcattggccgacaagttcaatgcgccgctagtggcgaccaacgat
gtgcgtttcatcaagcagacggactacgacgcccatgaaacccgcgtctgcatcggcgaa
ggccgcgccctggacgatccgcggcgctcgcgtaactacagcgaccagcaatacctgaaa
agcccggaggaaatggccgagctgttcagtgacctgcctgatgcggtggccaacaccgta
gagatcgccaagcgctgcaacatccaggtacagctgggcaagcacttcctgccagacttc
ccgacccccaacggcatgggtatcgacgattaccttcgacatgtctctcatgagggcctg
gaggaacgtttggcggtgctgtggcccaaggagaccacacccaactacgaagaaaagcgc
caggtttacctcgatcgcttgaagttcgagctggatatcatcatccagatgggcttccct
ggttacttcctgatcgttatggacttcatcaagtgggccaagaacaacggcgtgccggta
ggcccgggccgggggtcgggtgccggctccttggtggcttacgtactgaagatcaccgac
ctcgatccgctggcctacgacttgctgttcgaacgtttcctcaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggtcgcgaccgggttattgaatacgtg
gctgatgcctatggccgcaacgccgtaagccagatcatcaccttcggtaccatggctgcc
aaggccgtggtgcgcgacgtggcacgggttcagggtaagtcctacggcttggcagatcgc
ctgtcgaagatgatcccgttcgaagtcggtatgaccctggagaaggcctacgagcaggaa
gaaatgctccgcgacttcctcaagaccgatgaggacgccaaggaaatctgggacatggcc
ctcaagctcgagggtgtctgccgtggtaccggtaaacacgctggtggcgtggttatcgcg
cccaccaagctcaccgatttctcgccgatcgcctgtgatgaagagggcggtggcctagtc
actcagttcgacaaggatgatgtcgaggccgcgggcctggtgaagttcgacttcctcggt
ctgcggaccctgaccatcatcaagtgggcgatggagaccatcaaccgcgagcaggccaag
aaaggcctggatgacctcaacatcgatttcatcccgctggacgataagaaaacctacgac
ctgttgcaaaaggccgaaaccactgcggtattccagcttgaatcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagaccttatcgcactggttgcgttgttc
cgtcccggcccgttgcaatcgggcatggtggatgacttcatcaaccgtaagcatggtcgc
gccgagcttgcctatccgcattcggactaccagtacgaaggcctaaagccagtactggca
ccgacctacggcatcatcctgtaccaggaacaggtgatgcagattgctcaggtgatggcc
ggctacaccctcggtggcgcggacatgctgcgccgggccatgggtaagaaaaagcccgag
gagatggccaaacagcggggcggcttcattgaaggctgtgccagcaacaacatcgacccg
gacctggcgggtaacatcttcgacctggtagagaagttcgccggttacggtttcaacaaa
tcccactccgccgcctatggcctggtgtcttaccagacagcctggctgaaaacccactac
ccggcaccattcatggccgcggtgctgtcggcggacatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcagcatgaagctgcgcctcgatgcgcctgacgtgaacacg
tcagacttcaagttcacggtcaacgatgacggccgtatcgtctatggtctgggcgcgatc
aagggcgtcggcgaggggccggtagaggccattgtcgatgcgcgcaaggccggtccgttc
aaagacctgttcgacttctgtgaacgcgtcgacctcaaacgcatcaacaagcgaaccctc
gatgcgctgattcgcagtggtgccctggaccgcctggggccgtacttccacgacgagctc
aaggcctaccaggccaacatcgaccgtaaccgcgcggtattgctggccgcgatggaagaa
gcgatcaaggctgccgagcaaaccgcgcgaaccgctgacagtggtcacgccgacctgttc
ggcggtttgttcgtcgaggaagacgccgatgtctacgccaaccaccgcgcggcccgtgag
ctgaccctcaaagagcgtctgcgcggcgaaaaggacaccctcggcctgtaccttaccggg
cacccgatcgatgaatacgaaggtgagatccgccgttttgcccgccagcgcatcattgac
ctgaaacccgcccgcgacacccagacggtggccggcatgatcatcgccctgcgggtcatg
aagaacaaaaagggtgacaagatgggctttgtcaccctcgacgaccgttctgggcgtatc
gaggcctcgctgttcgctgatgccttcatggccgcccaagccctgctgcagaccgacgca
atggtggtggtcgaaggcgaggtcagtaacgatgacttctccggtggcctgcgcctgcgg
gtcaagcgcgtcatgagtatggaagatgcccgtaccaacctggccgaaagcctgcgcctg
aaggtgcataccgacgccctcaagggtgaccggctgaattggctgggcgaattgttcaag
cgtcatcgtggtgcttgcccgatcaccatggagtacaccggcagcgatgccaaggcgatg
ctgcagtttggcgaaagctggcgaatcgacccggcagatggcctgattcaggcactgcgt
gaccagttcgggcgtgagaacgtctttttgcaatatcgatga
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integrated database retrieval system
