Pseudomonas tussilaginis: QC631_022355
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Entry
QC631_022355 CDS
T11576
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptus Pseudomonas tussilaginis
Pathway
ptus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC631_022355 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptus03400
]
QC631_022355 (recD)
Enzymes [BR:
ptus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QC631_022355 (recD)
DNA repair and recombination proteins [BR:
ptus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QC631_022355 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
AAA_22
UvrD-helicase
AAA_16
AAA_17
SLFN-g3_helicase
AAA_28
TraI_hel_assoc_N
PhoH
NTPase_1
AAA_25
T2SSE
nSTAND3
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
XDO21039
LinkDB
All DBs
Position
complement(4874384..4876465)
Genome browser
AA seq
693 aa
AA seq
DB search
MSRTLVDLLPTPLDAGHLAALAPLSNSADLLALLDRWVERGWLRALDRAFVGFLDERDPG
GDPLVLLAAALASHQLGHGHVCLDLGETLAEPDFALSLPPEGDVLAGPLLLPSQLLERLA
LDTWLQRLASSRLVANGASVEQASRPLVLSSQRLYLRRYWSYERQIDNALRQRLEQVEPT
PSDLSERLAQLFAGGSQPGQVDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALLQA
PAVEAGRPLRIRLAAPTGKAAARLTESIGQQVERLAVDTPVRDNIPTDVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLAALPPHARLVLLGDKDQLASVEAGA
VLGDLCRDAEAGRYSAQTQAWLEQVSAETLVGSELQAGSAEQYPLAQQVVMLRFSRRFGE
TSGIGRLARLVNLQDAEQARALLLQTQDDVFGLTLRGEQDRALDRLLLDGLGRGAEGPQG
YRSYLQVIGRQRPSLSTPSDDPRWEAWAMAVLQGFETFQLLCAVRKGPWGVEGLNQRVGR
VLGAAGLIDVEQPWYEGRPVLMTRNDYGLGLMNGDIGIALRLPDEQHPGQQVLRVAFARN
DGRGGVRFVLPSRLNEVETVYAMTVHKSQGSEFTHTALVLPDALNPVLTKELIYTGITRA
KSCFTLIEPRQGIFEDAVRRKVKRISGLMLEQV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtaccctcgtcgacctgttgccgacacccttggatgccggccatctggcggca
cttgcaccgttgagcaacagtgctgacttgctggccttgctcgatcgctgggtcgagcgt
ggctggttgcgcgctctggaccgggccttcgtcggttttctcgacgagcgtgacccgggc
ggcgatccgctggtgctattggccgcagccttggccagccaccagttggggcatgggcat
gtgtgcctggatttaggtgagaccttggccgagccggactttgccttgtcgctgccaccc
gagggcgatgttctggcaggcccactgttgttaccctcacagttgcttgaacgactggcg
ttggacacctggttgcaacgtctggccagcagccgtctggtcgccaatggtgcgagtgtt
gagcaggcctcgcgaccgttggtactcagcagccagcgtttgtacctgcgtcgttactgg
agctatgaacggcagatcgacaacgccctgcgccaacgcctggaacaagttgaaccgacg
cccagcgacctgtcggagcgcttggcgcagctgtttgccggtggcagccagccgggtcag
gtggactggcagaaacttgcctgcgccttggccactcggggggccttcagcatcattacc
ggtggtcctggtaccggcaagaccaccaccgtggtgcgcttgctggctttgctccaggcc
ccagcggtggaggcggggcgccctttgcgtattcgcttggcggcccccaccggcaaagcg
gcggcacgacttaccgagtccatcggccagcaggttgaacgcctggcggttgacaccccg
gtgcgggacaacattcccaccgatgtctccacggtgcaccgcctgctcggtagccgcccg
ggctcgcgacattttcgccatcatgcgggtaatcccttgcccctggatgtgttggtagtc
gatgaagcgtcgatgatcgacctggagatgatggccaacttgctcgccgcgctaccgcct
cacgctcgccttgtgttgctgggagacaaggatcagttggcttcggtggaggcgggtgcg
gtgctcggtgacctctgccgggatgccgaggccggccgttatagcgctcagacccaggcc
tggctggagcaggtcagtgctgagacgctggtgggcagtgagctgcaggcgggctctgcc
gaacaatatccactggcgcagcaggtggtgatgttgcgtttctcccgccgcttcggcgag
accagtggtatcgggcgtttggcacggctggtcaatctgcaggatgccgagcaggcccgt
gccttgctgctacaaacccaggatgatgtattcggcctgaccctgcgcggtgagcaggat
cgcgccctcgaccggctgctgctcgacggtcttggtcgcggagccgaggggccgcagggc
taccgcagctatttgcaggtcattggccggcaacgtccgtcgctgtccacgccatccgat
gacccgcgctgggaggcgtgggccatggccgtgttgcagggttttgagaccttccagttg
ctgtgcgccgtgcgtaaaggcccgtggggtgtcgaaggcttgaatcagcgggtcggtcgt
gtgcttggcgccgccggtctgatcgatgttgagcaaccctggtatgaaggccgaccggta
ctgatgacccgcaatgattatgggctgggccttatgaatggcgacatcggtattgccttg
cgcctgcccgatgaacagcaccctggccagcaagtgttgcgggtggcctttgctcggaat
gatggccgcggtggtgtacgcttcgtgttgcccagccgtctcaatgaggtagaaactgtt
tacgccatgactgtgcacaaatctcagggttcggaattcacccatactgccctggtgttg
cctgacgctctgaacccggttttgaccaaggaattgatctataccggtatcacccgggcg
aaaagctgtttcactttgatagaaccgcgacaaggcattttcgaggatgcggtgcggcgc
aaggtcaagcgcatttccgggttgatgctggagcaggtatga
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