Pseudomonas tussilaginis: QC631_022365
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Entry
QC631_022365 CDS
T11576
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ptus Pseudomonas tussilaginis
Pathway
ptus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC631_022365 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptus03400
]
QC631_022365 (recC)
Enzymes [BR:
ptus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QC631_022365 (recC)
DNA repair and recombination proteins [BR:
ptus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QC631_022365 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XDO21041
LinkDB
All DBs
Position
complement(4880139..4883618)
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AA seq
1159 aa
AA seq
DB search
MPHANPLLPGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDQGGCGIAAAIEVQLPGSFMWQLYRRVLGREEIPEVSLLDKAPLTWRLMRLLPEV
IDKPHFEPLQRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGRHVLNTARGE
SKPLPPANCWQAELWRALLVDVGEEGMAQSRAGVHQRFIERINSLEHAPAGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPSLI
DAQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYRAAFSDGRIDLFSDNEPQNLLNQL
QDDILELRPLAESRALWPEVNPAKDRSVRFHIAHSPQREVEILHDQLLARFSADPHLRPR
DVIVMLPDINTYAPHIRAVFGQLGRDDPRFIPFTLTDQGQRGRDPLLIALEHLLKLPDSR
FAVSEILDLLDVPALRARFAIKESDLPTLHRWIEGAGIRWGLNAEQRASLGLPADLEQNS
WRFGLRRMLLGYAVGTGEGCDGIEPFDEIGGLDAALIGPLVALLDALEIAYQQLSTPATA
AQWGERLHALLQVFFLAETEHDDYLLVQLQTLRETWLQTCESVGLEDLLPLTVVREAWLA
GLDQGRLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLAGGWRLAG
AKDGDKLDGGEQLLQALTVEHPLQPFSARYFHKGSSLFSYAREWRTLHLPGEEQPKVEEQ
LPPYSNDEALSLTLLQDFLRHPVRHFFSQRLKVFFESVEAPLADEEPFVLDALQRYSLSE
SLLVAALASPEDAGQALGAQARRLQGSGMLPLAGFGECLQAELVEPLPDLLQRHQQLLHQ
WPTALDSALPIRFEHRQLKLEGWLGRVYQRDDQSLLSITTLPNGISSGRSLKWHRLTSTW
VMHLAACAVGLPLHSAVVATDVTLLLTPIEQPRAADLLGDLLLARQAGMCAPLPVAVKTA
IAWLAQTDPDKALAAAAKAYEGDGQNSFGERSESTALARQFTDFAALTASEEFEGWCETM
YRPMFEAPWQTLGNEEDGQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgcaaacccactccttccaggattcatggtggttcatggcaaccgcctggat
gaactgcgcagcctggtggtgagctggatgcggcgctatccgctggcgccactggaaaac
gagatcgcactggtacaaagcaacggtattgcccaatggctcaagcttgcgctggccgaa
gacccggaggatgacgaccagggcggctgcggcattgcagcagcaatcgaggtgcagtta
cccggcagtttcatgtggcaactctaccgtcgggtgctgggtcgcgaagaaattccggaa
gtttccctgctcgataaggcaccactgacctggcgtctgatgcgtctgctgccggaggtg
atcgacaagccgcatttcgagcccttgcagcgcttcctgactgacgacagtgacctgcgc
aagcgctaccagcttgccgagcgcctggccgacctgttcgaccaataccaggtctatcgt
gccgactggctcaaagactgggccgccggtcgacatgtgctcaacaccgctcgcggtgag
tcgaagccactgcctccggccaattgctggcaggcagagctgtggcgtgcgctgctggtg
gatgtgggggaggagggcatggctcagagtcgtgccggggtgcatcagcgcttcatcgaa
cgaatcaacagccttgagcacgcgcctgctggactgccgtcacgggtgattgtcttcggc
atttcctcgttgcccgcccaggcattggaggcgttggccgggctcgcacgtttcagccag
gtgttgctctgtgtgcacaacccctgtcgtcaccactgggcggatatcgttgccgacaag
gacctgctgcgtcatcagtacaaacgccagcaacgcaagcagggcatgcccagcctgatc
gatgcacaaaccctgcaccagcacgcccatccactgctggcagcctggggtaagcagggc
cgtgactacatcaacctgctcgacagctacgacgacccaggcagttaccgtgcagcattc
agtgatggccgcatcgacctgttcagtgacaatgaaccgcagaacctgctcaatcagttg
caggacgacattctcgaattgcgcccgctggcagaaagccgcgcactatggcctgaagtc
aatcctgccaaggatcgctcggtacgcttccatatcgctcacagcccccagcgtgaagtg
gagattcttcacgaccagctgctcgcccgcttcagtgccgacccgcacctgcgcccgcgt
gacgtgattgtcatgctgccggatatcaacacctacgcaccgcatatacgtgccgtattt
ggccagttgggccgcgatgaccctcgcttcattccgtttaccctgaccgatcaggggcag
cgcggtcgtgatccgctgctgattgccttggagcatttgctgaagttgccggacagccgc
tttgcggtcagcgagattctcgacttgctcgatgtgcccgccttgcgcgcccgtttcgcc
atcaaggaaagcgatctgccgaccctacaccgctggattgaaggcgccggaatccgctgg
gggttaaacgccgagcagcgcgcaagtctcggcttgccggctgatctggaacagaacagc
tggcgattcggcctgcggcggatgctccttggctatgccgtgggcaccggcgaaggctgc
gacgggatcgagccatttgatgagatcggtgggctggacgcggcactgatcgggcccctg
gtggccctgctcgatgcgctggaaatcgcctatcagcagttgtctacaccagccacggcg
gcgcaatggggcgagcgtttgcacgcgctgttgcaggtattcttcctggccgaaaccgag
catgacgactacttgttggtacaactgcagacgttgcgggagacctggttgcaaacctgt
gaatcggttggccttgaagacttgctgccgctgaccgtggttcgagaagcgtggttggcc
gggcttgatcaggggcgattgtcacaacgattcctggccggttcggtgaatttctgtacg
ctgatgcccatgcgcgccataccgttcaaagtggtctgcctgcttggcatgaatgatggt
gactacccacgcgcgcaaccgccgctggacttcgacctgatgggcagtgactaccgtcca
ggtgatcgctctcgtcgtgaagatgaccgttacttgctgctggaagcgctgctttcggcg
cgtgatcagttgtatgtcagttgggtcggtcgcagtattcgtgacaacagtgaacgacca
gcctcggtactgatcggccagctacgcgatcaccttgccggcggttggcgactggccggc
gccaaagacggcgacaagctcgacggtggcgaacagctgttgcaggccttgaccgtcgaa
cacccgttgcagcccttcagcgcccgttactttcacaaaggcagcagcttgttcagttac
gcacgcgagtggcgaaccttgcaccttcctggcgaagagcagccaaaggtcgaggaacaa
ctacctccctatagcaacgatgaagccttgagcctgaccttgcttcaggacttcctgcgt
catcccgtgcggcacttcttcagtcagcgcctgaaggtatttttcgagtcggtggaagcc
cccttggccgatgaagagccctttgtacttgacgccttgcagcgttacagcctcagcgaa
agcctgttagtcgctgccctggcgagccccgaggacgccggccaggcactgggtgctcag
gctcgtcgcctgcagggtagcggcatgctgccattggcgggcttcggcgagtgcctgcaa
gccgagttggtcgagccgttgccggatttactgcagcgtcatcaacagctgttgcaccag
tggcccactgccttggacagcgccttaccgattcgcttcgaacaccgccaactcaaactc
gaaggctggcttgggcgggtttatcaacgcgatgatcaatccttgctcagcattaccacg
ttgcccaatggcatcagcagcggtcgatcactgaaatggcatcggttgacgtcaacctgg
gtcatgcatttggccgcctgtgcagtggggttgccgttacatagtgctgtggtggccacg
gacgtcaccctgttactgacaccaattgagcaaccccgtgcggcggacttgcttggtgac
ttgctgctggcccgccaggctggcatgtgcgcgccgctgcctgtggcggtcaagaccgcc
attgcctggctggcccagactgatcccgacaaagcgctggctgctgcggccaaggcctat
gaaggcgatggtcagaacagctttggcgaacgtagcgaaagcaccgcgctggcccgtcaa
ttcactgactttgcggcgttgactgccagcgaagaattcgaggggtggtgtgaaaccatg
taccggccgatgttcgaggcgccctggcagaccttaggcaacgaagaggacggccaatga
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