Pseudomonas tussilaginis: QC631_024980
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Entry
QC631_024980 CDS
T11576
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ptus Pseudomonas tussilaginis
Pathway
ptus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QC631_024980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptus03400
]
QC631_024980
Enzymes [BR:
ptus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QC631_024980
DNA repair and recombination proteins [BR:
ptus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QC631_024980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
XDO21536
LinkDB
All DBs
Position
5466577..5467356
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGMNGDEDLN
QKFKLMDDFAKYLDKQRRKRREYIYCGSLYVAQQKLDVKNWRDGQQSPGFLAPERAWMDT
VVGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtaaatggcattcaggctgcagtcgagcgtggtttgctc
agctggctgcaagcccagaatgccgacgtcatctgccttcaggatacccgcgcctcggcc
tttgaactcgacgacccagcttttcagcttgatggctacttcctttatgcctgcgacgca
gaagttcccgcccaaggcggcgtggcactttattcgcggttgcagcccaaggcagtcatc
agcggcctgggcttcgagacagccgaccgctacggacgttacctgcaggccgatttcgac
aaggtaagcatcgcaacgctgctgctgccttcgggaatgaacggcgacgaagacttgaac
cagaaattcaagttgatggacgacttcgccaagtacctggacaagcagcgacgcaagcgc
cgcgagtacatctattgcggctcgttgtacgtggcgcagcagaagctcgacgtcaagaac
tggcgcgacggtcagcagtcgccgggtttcctggcgccggaacgcgcgtggatggacacc
gtcgtcggtgacatgggttatgtcgacgccctgcgtgaagtcagccgtgaaggcgaccag
tacagctggtggccggataacgaacaggccgagatgctcaacctgggctggcgtttcgac
tatcagttgctgaccccgggcctgcgtcgcttcgtgcgtagcgcacgcctgccgcgccag
ccacgcttctcccagcacgcgccactgatcgtggactacgactggacgctgacgatctga
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