Pseudomonas trivialis: AA957_00620
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Entry
AA957_00620 CDS
T04006
Name
(GenBank) decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv00300
Lysine biosynthesis
ptv00470
D-Amino acid metabolism
ptv01100
Metabolic pathways
ptv01110
Biosynthesis of secondary metabolites
ptv01120
Microbial metabolism in diverse environments
ptv01230
Biosynthesis of amino acids
Module
ptv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AA957_00620
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AA957_00620
Enzymes [BR:
ptv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AA957_00620
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AKS04681
UniProt:
A0A0H5A1P7
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All DBs
Position
134866..136260
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AA seq
464 aa
AA seq
DB search
MPITTTYLNEVRPEVHLSKMLNPLLDASIAQLLHNQPDTLLKLVAQHGSPLNLVWPHAFT
LNTRALQSVLEQHEVQHAIFYGAKANKSQCLLGAAKASGIGVDVSSLYEMQAALRAGVPA
DQLCATGPAKTEDFHRQLVQAGALICVDSLEEFDHLKTLLEASSEAIKARVLLRYRPNNC
AASRFGMGAADLLVCLHSLTGLRAFFDFEGFHFHLGGYGFESRAQAFREVADFVDVARKM
GLTPTMIDIGGGLPIRYIEPHAYDRFIHNDNTPSHYYNQSVPKSYYPYGSNLTASQWLNS
FLESAFSPRQSIAQYLKANHITLALEPGRSLVDQAAISVFRVTRSKKLADNKTVLFVEGS
SFSACETWFASEYLVDPILISAASTSPTPMQAYIAGHSCLDDDVITQRLINFSVSPKAGD
LLIYANTAGYQMDLLENEFHRHPLPRRMVATCCTHGNYAFSPDY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctattacaacaacgtatctcaatgaggtgcgccctgaagttcatctttcgaaaatg
cttaatccattattggatgcaagcatcgcccagctgttacataaccaacccgacaccctg
cttaaacttgttgcgcaacatggctcgcccctgaatcttgtatggccacatgcctttaca
ctgaacacccgtgcattgcaatcagtgctggaacagcatgaagtgcagcatgcgatcttc
tatggcgccaaagccaacaagtcgcaatgtttgctgggcgcggccaaggcgtccggtatc
ggcgtcgacgtttccagcctttacgagatgcaggcagcactgcgcgccggtgtgccggcc
gaccagttgtgtgccaccggccctgccaaaaccgaggattttcataggcagctcgtgcag
gccggcgccctgatctgcgtggattcactggaggaattcgaccatctgaaaacactgctc
gaagccagcagcgaggccatcaaagccagggttttactgcgttacaggcccaacaactgt
gcagcaagccgcttcggaatgggggccgcggacctgttggtgtgcttgcactcactgacc
gggcttcgggctttttttgacttcgagggcttccatttccacctcggtggctatgggttc
gaatcccgagcacaggcctttcgtgaagtggcggatttcgtcgatgtggctcggaagatg
ggattgaccccgaccatgatcgatatcgggggaggcttacccatccgctatatcgaacca
cacgcctacgatcgttttatacacaacgacaatacgcccagtcactattacaaccagtcc
gtgcccaagtcttattacccttacggcagcaacttgacggcgagccaatggttgaattca
tttctggaaagtgccttctcgccgcgccagagcattgcccagtatttgaaagccaaccac
atcaccctggcattggagccaggccgaagtttggtggaccaagccgcaatttcagtattt
cgcgttacacgcagtaaaaaactggcggataacaaaactgtcttgtttgtcgaaggcagc
agcttcagtgcctgcgaaacatggttcgcgtcggaatacctggtcgacccaattttaatc
agtgcagcatcaacatcgcccacgccgatgcaagcctatattgccgggcatagttgcctg
gacgacgacgtcattacccaacgcctgatcaactttagcgtttcccccaaagccggcgac
ttattgatctatgccaataccgccggttatcaaatggacttgctggagaacgagtttcat
cgtcaccccctgccccggcgaatggtggcgacctgttgcacgcacggtaactacgcgttt
tcacctgactactag
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