Pseudomonas trivialis: AA957_01005
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Entry
AA957_01005 CDS
T04006
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
ptv
Pseudomonas trivialis
Pathway
ptv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AA957_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptv03400
]
AA957_01005
DNA repair and recombination proteins [BR:
ptv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AA957_01005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
Motif
Other DBs
NCBI-ProteinID:
AKS04750
UniProt:
A0A0H5A5H1
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All DBs
Position
222930..223763
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AA seq
277 aa
AA seq
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MPRAIWKGAISFGLVHIPVSLVSATSSQGVDFDWLDKRSMDPVGYKRINKTTGKEVTKEN
IVKGVAFEKGRYVVLSEEEIRSAHPKSTQTIEIIAFVASDQIPLQNIDTPYFLAPDKRGG
KVYALLRETLKKTNKVALANVVLHTKQHLAALMPLDSALILVMLRWPAEVRSLDDLELGS
DVTKPTLAKGELDMAKRLVEDMSADWQPEDYRDSFQEKIMALVAKKAKAGKIEDVESSTD
GEERKSADVIDLTELLKRSLAGKPAKKPAVKKSSKAS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggcaatctggaaaggcgccatcagctttggcctggtgcatataccggtgtca
ctggtctcggccacgtcatcacagggcgttgactttgactggctcgacaaacgcagcatg
gacccggtgggctacaagcgcatcaacaagaccaccggcaaggaagtcactaaagagaac
atcgtcaaaggcgtcgcgttcgagaaaggccggtacgtggtgctcagcgaagaagaaatc
cgttcggcgcaccccaagtcgacccagaccattgaaatcatcgcgtttgttgccagcgac
cagattccgttgcagaacatcgacaccccctactttctcgccccagataaacgcggcggc
aaagtgtatgcgttgctaagggaaacccttaaaaaaaccaataaagtcgccctggccaat
gtggtgctgcacaccaagcagcacttggcggcattgatgcccctggactcggccctgata
ctggtgatgttgcgctggcccgccgaggtgcgcagcctggacgatctggaactgggcagc
gacgtgaccaaacccacactggccaaaggtgagctggacatggccaagcgcttggtggaa
gacatgagcgccgactggcaaccggaggactaccgcgacagcttccaggagaaaatcatg
gcgctggtggccaagaaggccaaggccggcaagatcgaggacgtggaaagcagcacggac
ggtgaggagcgtaagtcggccgatgtgattgacctgacggaattgctcaagcgcagcctg
gccggcaaaccggcgaagaagcccgctgtgaagaaatcctccaaggcctcataa
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