Pseudomonas trivialis: AA957_02155
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Entry
AA957_02155 CDS
T04006
Name
(GenBank) type IV secretion protein Rhs
Organism
ptv
Pseudomonas trivialis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Tox-ART-HYD1
TEN_YD-shell
OCRE
Motif
Other DBs
NCBI-ProteinID:
AKS04963
UniProt:
A0A0H5A4Y1
LinkDB
All DBs
Position
502847..507460
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AA seq
1537 aa
AA seq
DB search
MTHASHIALIEFELDGFHQSLDIYRQQMGAWYSRALDSVSHGLDMPSLLGMDRVLRVGDS
QRSVSMADTDFATVAQCPLGGELKIESLFESVYDVPIGDIPVEVVGLDDGSSTVIMLDEQ
GKGSYHCAAGGRYQVRVQGGVSEEQVDALFASYAGLTADLEQWLRSQWAGFKPHWERSTA
SAIGSGLLAGSWAAIRDVWDSIRLVQAILEDPLKFVEQLGDQAAKLAQIATDAPKVMEQA
MLLASDEAALFLLVRTAMIWLDALPPGEMAEVAAGFVVSLLIDLVIGVVLTLALPAAGVA
YLSLRLVKYGARILEAAVGFVRGLLAILTKFMQAVDRYKAVAVRGVVGRLKQGTMQMRWK
ARQNAVLKQTEHVDDVPVGSKNPAGDAAAASDKTATNGCPVSMVTGEELLTLTDGALDGI
LPFEWTRLYRTSAVEVDCGLGFGWSHSLAHRLAVSGDSVVWTDHENRSTTLPLPSVSRPA
ITNSLAEAAIYLGSLPDELVLSQGSRFYHFRDGVLTEISDAYDNRLRIFRNYLGQIERLD
NGVGRSLFLRYASGRIVAVDYQVERAVDDGPFVWVTEQNVVSYAYDGAGRLVSATNAVGE
SEVYRYDEQHVILERGLAGGASFFWEWERSGKAARCVRHWASFSQMDTRYVWEDNGQVTV
FNADGSQEVYVHDQRARLVQRVDPDGAEHFKSYDDKGRLTVEQDPLGAVTAYQYDDAGRL
VALFPGDDEPTSYEHENGFVRVVRRGLAVWKYERNDQGDVTRRTDPDGHSTDYSYNKYGQ
LTGIWYPDHSSQRLVWNERGQLLEEQLPNGGIKRYRYDDLGQQVAREDEHGALTQYQWDS
VGRLIRAVLPGGATREYSYNAYGKITSERDELGHVTRYEYADGLHLISCRINADGSQVKY
RYENVRLLLTEIENEVGETYRLQYHSNGLIQQETGFDGQRTAYVYDLNGNLQEKTEHGDD
GSQLVTRYERDHAGRLVRKTLPDGNIVDYAYDRQGNLLSVDDGHWALAYEYDPQNRLTAE
HQGWGTLRYGYDACGQLKNLRLPDNNRLTFNHDKGGHLSTVELNGAVLTSHLFSAGREQQ
RAQGKLLSSYQHDDQGRLFNQGIADAEGTVYRRHYDYDKPGNLTRLIDTRKGEHHYHYDP
LSRLTRANHSQGEQERFGHDPAGNLLMQDRPGPDIVAGNRLMIQGDRHYDYDAFGNLIRE
RRGKGQQLVTEYRYDCQHRLIGVTQPNGQTASFRYDPFGRRISKTVDGITTEFFWQGDKL
IAEHHADRHRSYLYEPDSFRPLALLEGFGPKDTKPYHYQLDHLGTPQELTAPDGEIVWSA
HYRAYGEITRLDIGKVDNPLRFQGQYFDSESGLHYNRHRYYHPDLGRYLTPDPVKLAGGI
NAYQYVPNPTGWVDPLGLSPCPSDDGCKSTSNAKSPTKHAVAHDGEPTLPIPASKQENTV
RVRHYTSRAGSKGIEKEGVIMAQDNNRVYLEPAKSKVLSPQDAQNKYHIDKSKGRDYIEL
DVPESQLEMVKNPRYNTMELTVKGNLTLNNPKFTRRK
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcttcccacatcgcccttatcgaatttgagctcgatggctttcatcagagt
ttggacatttatcgccagcagatgggcgcctggtattcgcgtgccctggattcggtaagc
catgggttggacatgccgtcgttgctggggatggaccgggtgttgcgggtgggggattca
cagcggtcggtgagcatggctgatacggactttgcgaccgtggcccagtgcccgttgggc
ggtgagctgaagatcgagagcctgttcgagtcggtgtacgacgtgccgatcggtgatatc
ccggttgaggtggtcgggctggatgacggcagttccaccgtaatcatgctggacgaacag
ggtaaaggctcgtaccactgcgccgctggcgggcggtatcaggtgcgggtgcaaggcggc
gtttccgaggaacaggtggacgcgttatttgcctcttacgccgggctgacggcagatctg
gagcagtggcttcggtcgcagtgggccggatttaagccgcattgggagcgatctactgcc
agcgcaattggcagcggcctattggcgggcagctgggccgcgatccgtgatgtgtgggac
agcatcaggctggtgcaggcaattcttgaagacccactgaagttcgtcgagcaactgggt
gatcaggccgccaagttggcgcaaatcgccaccgacgcacccaaggtcatggagcaggcg
atgttgctggccagtgatgaggcggcgctgttcctattggtgcgcacggcgatgatctgg
ctagacgcgttgccgcccggtgaaatggccgaggtggcggctgggtttgtggtgtcgttg
ctgattgatctggtgattggcgtggtgttgaccctcgcgttgccagcggcgggcgtggcg
tatttgagtttgcggttggtcaagtatggcgcgcggatcctcgaggcggcggtgggcttt
gtcagggggcttctggcgattctgacgaagtttatgcaggccgtggatcgctataaggcg
gtggccgttcgcggggtggttggcaggctgaagcaaggcacgatgcagatgcgctggaag
gcgcggcagaacgcggttttgaagcagacagagcatgtcgatgatgtgcctgttggttcg
aaaaatccggcgggagatgcggcggctgcttcggacaagaccgcgaccaatggctgcccg
gtttcgatggttaccggggaggaactgctgacgctgactgatggagcactcgatggaatt
ctgccgtttgagtggacacggttatatcgcaccagtgcggtggaagtggattgtgggctg
gggtttggctggagtcactcgctggcgcatcggctcgcggtttccggtgactcggtggtg
tggacggatcatgagaatcggtcgaccaccctgcccttgccatctgtttctcggccagca
atcactaatagcctggctgaagcggcgatctacttggggtctttgcctgatgaattagtg
ctgtctcaagggtcacgtttctaccactttcgcgacggtgtgctgacagagatcagcgat
gcgtatgacaaccggctgcgtattttccgtaactatctggggcagattgagcggctggac
aacggtgtggggcgctcgttgtttttgcgctatgcgtcgggccgtattgttgcggtggat
tatcaggttgagcgggcggtggatgacggtccgtttgtctgggtgacggagcagaacgtt
gtttcctacgcctatgacggtgccgggcggttggtttcagcgaccaatgctgtaggtgaa
agtgaggtttatcggtacgacgaacagcacgtcattcttgagcgtggcttggccggtggg
gcgagtttcttttgggagtgggaacggtctggcaaggccgcgcggtgtgttcggcattgg
gcgagcttttcgcagatggacacgcggtatgtgtgggaggacaacgggcaggtcacggtg
tttaacgctgatggcagccaggaagtctacgtgcatgaccagcgggcgcggctggtgcag
cgcgtggatccggatggtgctgagcatttcaaatcctacgatgacaaaggccggttgacg
gttgagcaggatccgctgggggcggtgacggcgtatcagtatgacgacgctgggcgtttg
gtggcgttgtttccgggggatgatgagccgacttcctacgagcatgagaatgggttcgta
cgggttgtaaggcggggtctggcggtttggaaatatgagcgtaatgaccagggcgacgtt
acgcgtaggaccgatccagacggtcattccacggactatagctacaacaaatacgggcaa
ctgacggggatttggtatcccgatcacagcagtcagcggctggtgtggaatgagcgtggg
cagttgcttgaagagcaattgccgaatggcggtatcaagcgctatcgctatgacgatctg
gggcagcaggttgcccgtgaggatgagcatggcgcgctgacccagtatcagtgggacagc
gtgggccgtttgattcgcgcggtgctgcctggcggtgcaacgcgggaatacagctacaac
gcttacggaaaaatcacctccgaacgcgatgaactggggcatgtcacccgctatgaatac
gccgacggcctgcatctaattagctgccgcatcaatgccgatggctctcaggtcaaatac
cgttacgaaaacgtcaggttattactgaccgaaatcgaaaacgaagtcggcgaaacttac
cggctccagtaccacagcaacggcctgatccaacaggaaaccgggtttgacggccagcgc
acagcttacgtttatgacctgaacggcaaccttcaggaaaaaaccgaacacggtgacgat
ggcagtcagttagtcacccgctacgagcgcgaccacgccggacgactcgtaagaaaaacc
ctgccagacggcaacattgtcgattacgcctacgaccgccaaggcaacctcctcagcgtt
gacgacggccactgggcgctggcctacgaatacgatccccaaaaccgtctgaccgccgaa
caccagggttggggcaccttgcgctatggctatgacgcctgcgggcaactcaaaaaccta
cgtctgccggataacaaccgcctcaccttcaaccacgataaaggcggacacctttccaca
gttgaactgaatggtgcggtactgacctcacacctattcagcgccggccgcgagcagcaa
cgcgcccaaggaaaactgctcagcagttaccaacacgacgatcaagggcgcctgttcaac
caaggcatcgccgatgccgaaggcactgtttaccgccgccactacgactacgacaaaccc
ggcaacctcacccgcctcatcgacacccgcaaaggcgaacaccattaccactacgacccg
ctaagccgcctcacccgcgccaaccactcccaaggcgaacaggaacgcttcggccacgac
ccggccggcaacctgctcatgcaagaccgccccggcccggacatcgtggctggcaaccgc
ctgatgatccaaggcgaccgccattacgactacgacgccttcggcaacctgatccgcgaa
cgtcgcggaaagggccagcaactcgtcaccgaataccgctacgactgccaacaccgcctg
atcggcgtcacccaacctaacggccagaccgccagctttcgctacgacccgtttggccgc
cgcatcagcaaaaccgttgacggcatcaccaccgagtttttctggcaaggcgacaaactc
atcgccgaacaccacgcggaccgccaccgcagctacctctacgaaccggacagcttccgc
ccgttggcgctgctggaaggtttcggtccaaaagataccaagccctaccactaccaactc
gaccacctcggcacaccacaagaactcaccgccccagacggcgaaatcgtctggtctgcg
cactaccgcgcgtacggtgaaatcacccgcctcgacataggtaaagtcgacaacccgctg
cgcttccaaggccaatacttcgactcggaaagcgggctgcactacaaccgccatcgctac
taccatccggatcttggtcgctacctgacacctgacccggtgaagctggcgggtgggatc
aatgcataccagtacgtacccaacccgacgggatgggtggatccactgggtttgagccca
tgcccaagtgacgacggatgcaaatcaacaagcaatgctaagagccctacaaagcacgcc
gtagctcacgatggcgaaccaacactaccaattcccgcctcaaaacaagaaaacacagtc
agagtacgacattacacaagcagagcaggctcaaaaggcatagaaaaagaaggagtgata
atggctcaagataacaatagagtttatctcgaacctgcaaaaagcaaagtactgagccct
caagacgcgcagaacaaatatcatatcgacaaaagtaaaggccgagattacattgagctt
gacgtacctgagtcacaactagaaatggtgaaaaaccctagatacaacaccatggagtta
accgtaaaaggaaaccttacgttaaataacccgaaattcacgaggagaaaataa
DBGET
integrated database retrieval system
