Pseudomonas trivialis: AA957_03625
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Entry
AA957_03625 CDS
T04006
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
ptv
Pseudomonas trivialis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptv03000
]
AA957_03625
Transcription factors [BR:
ptv03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AA957_03625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
SGL
HTH_IclR
MarR_2
HTH_Crp_2
HTH_24
MarR
TrmB
HTH_20
HTH_7
HTH_23
HTH_Cmi2_C
Dimerisation
HTH_36
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AKS05240
UniProt:
A0A0H5A6R5
LinkDB
All DBs
Position
865179..866792
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AA seq
537 aa
AA seq
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MKTGDGTGALEKALDVLQAVGATPNGISQTQLAAQVQLPRTTMYRILATLVERGMIRRDP
TRKVYRLGFNYLEMVRNAYLEPDLVAAASAELRALRDLTGETSYLAVLDGNQVLSLERCD
GAHTLRSAASLGQGKPVYCTGQGKAILSALAPGARDDILKGLVLEPLTPLTITDRRRLLA
ELQITRTRGYALDDEEIRLGVRCVAAPIIDKHGSVRGALSVAGPAYRLTLERLTLLGPEL
ADAARRVGEQLRGEPSAHPTSATNVVPGPWAFHGAFPRWHAEQKRLYWADTLAPAIHCWD
GRSSRILSRLDFPVRAMEMHHDGLLVAHAGGWSLIDWQGAEHPMQDLLGSRLLALGTHPS
GTLWGCIRTSSGCVIGEVSAEGELRHGWSLSEQVSGFRWDATGTALYAIAPGTGDILRMQ
PGSNSVRRLATLPRGGGSLSGLALDAQGGVWTTQRDGWSLARFDAEGNLDRMIGLPVPSP
SDLCFAGEDGTTLYITSSRQELKLEVLGGAPDSGCLLQLEAEVGGQAVAASSWRLDS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccggggatggcacaggcgcgctggaaaaagccttggatgtcttgcaagccgtt
ggtgcaacgcccaacggcatcagccaaacgcagttggccgctcaggttcaattgccacgc
acaacgatgtatcggatcctcgccacactggtggagcgcggcatgattcggcgcgaccct
acacgcaaggtctaccggctgggcttcaattatctggagatggtgcgtaacgcctacctg
gagccggaccttgtggccgccgccagcgccgagcttcgtgcattgcgtgacctcacaggc
gaaacctcttacctggctgtactggacggtaaccaggtgttgtcgctggagcgttgcgat
ggcgcccacaccctgcgctctgcggccagcctcggccagggcaagccggtgtactgcacc
ggccagggtaaagccatcctttcagcgctagcgcccggcgcccgtgacgacattctcaag
gggctggtgctggaaccgctgacaccgctgacgatcaccgatcgccggcgcttgttggcc
gaattgcagatcacccgtactcgcggctacgcgctggatgatgaagagatacggctcgga
gtgcgttgcgtcgccgccccaatcatcgataagcatggcagcgtgcgcggtgcactgagc
gtcgccgggccggcctatcgactcaccctggagcgtttgacattgctcggcccggagctg
gcagatgctgcgcgacgggtcggcgaacaattgcggggggagccctcagcgcacccgacc
agcgctacgaacgtagtgcccgggccatgggctttccatggtgctttcccacgctggcac
gccgagcaaaaacggctttattgggcagacaccctcgcaccagcgatacattgctgggac
ggtcgcagcagccgcattctgagccgactggacttccccgtgcgcgccatggagatgcac
catgatggcttgttggtagcccacgcaggaggctggtcactgatcgattggcaaggcgcg
gaacatcccatgcaggatctgctcggctcccgcctcctggccttgggcacacacccatca
ggcacgctgtggggatgcatcagaacctcaagcggctgcgtaattggtgaggtgagtgct
gagggagaactgcgccatggctggagcttgagcgaacaagtcagcggctttcgttgggat
gctaccggcacggcgttatacgccatcgccccgggaacgggtgacatcctcaggatgcaa
cctggcagcaacagcgtgcggcgactggctaccttgccacgcggcggaggaagtctcagc
ggcctggccctggatgcacagggcggcgtgtggaccacccagcgtgatggctggagtctc
gcgcgcttcgatgcagagggcaatctggaccgcatgataggccttccagtacccagccct
tccgacctttgcttcgcaggtgaagatggcaccacgctgtacatcaccagctcccgtcag
gagctcaagctggaagtgctcggaggggcacctgactcaggctgcctactgcagttggaa
gcagaagttggagggcaggcggtggcggcgagtagctggcgcctggacagttaa
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