Pseudomonas trivialis: AA957_04330
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Entry
AA957_04330 CDS
T04006
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv00300
Lysine biosynthesis
ptv00470
D-Amino acid metabolism
ptv01100
Metabolic pathways
ptv01110
Biosynthesis of secondary metabolites
ptv01120
Microbial metabolism in diverse environments
ptv01230
Biosynthesis of amino acids
Module
ptv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AA957_04330
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AA957_04330
Enzymes [BR:
ptv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AA957_04330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
XdhC_CoxI
Motif
Other DBs
NCBI-ProteinID:
AKS05370
UniProt:
A0A0H5A732
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All DBs
Position
complement(1015929..1016915)
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AA seq
328 aa
AA seq
DB search
MTLFYDARGNIYGVVSPASLRSKGIDLPESAALAAQTRNRWTTAAITCECDWGSTPRPVG
AKAHRSDGLLVGPFQAEPPFDLLIVNTDGSLAERSGNGLTIFAQALTDQGLMTGASELRV
HHDKSDALTPVPTRVEPAVHEQVAGFWLELGLPAFGPMAVGAQAVERVMLGATELSHVSA
LAVINPQWATSQFVRVGNPHCVTLVEQVSALPDNAQMQQTALFEPLKAIAFAPPAGAGQP
CVAGINLQWAARQPGNRVIARVFERGEGPTASSGTSASAVACAAWRAGWVESGEVAVVMP
GGIAPVRLHTQGETLLSVSLFGAAQPQA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgttctatgacgcccgcggcaatatctacggcgtggtcagcccggcctcatta
agaagcaagggtattgatctgcccgaaagtgctgccttggccgcgcagacgcgtaaccgt
tggacaacagccgccatcacctgcgaatgcgattggggctcgacaccgcgcccggtcggc
gcaaaggcccaccgcagcgacggcctgctggtcgggccgttccaggccgagccgccgttt
gacctgctgatcgttaacaccgacggctctttggccgagcgcagtggcaatggcttgacg
attttcgcccaggcgctcactgaccagggcctgatgactggagccagtgagttgcgggtg
catcacgacaaatcggatgcgttgacaccggtaccgacacgggttgagccggcagtccac
gaacaggttgccgggttctggcttgagctgggtttacccgctttcgggcccatggcggtg
ggtgcgcaggccgttgagcgggtgatgctgggtgccactgaactgagccacgtgagcgcg
ctggcggtgatcaacccacaatgggcaaccagtcagtttgtgcgggtgggcaaccctcat
tgtgtgacgctggtcgagcaggtatcggcattgccggacaacgcacagatgcagcagaca
gccctgttcgaacccttgaaggcgattgctttcgcccccccagcaggtgccggccaaccc
tgtgtagccgggatcaacttgcaatgggcggcgcgccagcccggcaaccgcgtcatcgca
cgggtgtttgagcgcggagaagggcccactgcgtcttccgggaccagcgccagcgctgtc
gcttgcgcggcatggcgtgcgggttgggttgagagcggtgaggttgccgtggtgatgccg
ggtggcattgcgccagtgcgtttgcacactcagggcgagacgttgctgagtgtcagtctt
ttcggggctgcacagccgcaggcgtga
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integrated database retrieval system
