Pseudomonas trivialis: AA957_05005
Help
Entry
AA957_05005 CDS
T04006
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv00061
Fatty acid biosynthesis
ptv00071
Fatty acid degradation
ptv01100
Metabolic pathways
ptv01212
Fatty acid metabolism
ptv02024
Quorum sensing
ptv04146
Peroxisome
Module
ptv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AA957_05005
00071 Fatty acid degradation
AA957_05005
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AA957_05005
09145 Cellular community - prokaryotes
02024 Quorum sensing
AA957_05005
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptv01004
]
AA957_05005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptv04147
]
AA957_05005
Enzymes [BR:
ptv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AA957_05005
Lipid biosynthesis proteins [BR:
ptv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AA957_05005
Exosome [BR:
ptv04147
]
Exosomal proteins
Exosomal proteins of breast milk
AA957_05005
Exosomal proteins of breast cancer cells
AA957_05005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DUF5397
Motif
Other DBs
NCBI-ProteinID:
AKS05485
UniProt:
A0A0H5A7E0
LinkDB
All DBs
Position
complement(1155567..1157213)
Genome browser
AA seq
548 aa
AA seq
DB search
MPVAFRLPLQVFFEREARHPRHTFLVQPVGGEVQCLTWGDVGHQARCAAHWLRARELPHG
SHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLSHSEAALVFIGKLDDWP
AMAPGVPAGVPTISLPLCPPGAFDFSWADLQACSPIQDNPQPAASDLATIIYTSGTTGLP
KGVMHSFGALGFAATRGTELFGLGEGDRLLSYLPLCHVAERMFVEMASIYTGQTVYFAES
LDTFLTDLRRARPTALFGVPRIWTKFQMGVYAKIPQKRLDTLLRLPFIGKRVGHKVLAGL
GLDALRIALSGAAPVPEALLRWYQRLGLDVLEVYGMTESCGYSHVCRPGQQTLGWIGLPC
PGVEVRIDPSGEVQVRSGATMLGYFKDPQKTCETLTADGFLRTGDKGEQDADGRLRLTGR
LKEIFKTSKGKYVAPAPIENRLAEHPRIEQVCVVGDGLSAPIGLCVLSALEQDPQALRSS
LERWLEQVNGALDKHERLRQLVVVKDNWAVENGFLTPTLKIKRNVIESTYGAQFQVWSER
TETVLWQD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgcttttcgtttgccgttgcaggtcttctttgaacgtgaagcgcggcacccg
cgccatacctttttggtccagcccgttggcggcgaggtgcaatgcctcacttggggcgat
gtcggccaccaggcccgttgcgccgcgcattggctgcgtgcccgcgaactgccccacggc
tcgcacattgccttgatctcgaaaaactgcgcgcactggatcattgccgacctggcgatc
tggatggccgggcatgtttcggtgccgctgtaccccaatctcaccgccgactccgttgcc
catgtgctcagccattccgaggcggcattggtgtttatcggcaaactcgacgattggccc
gccatggcacccggtgtgccggcgggtgtgccgaccatcagcctgccgttgtgcccgccg
ggagcgttcgatttcagttgggccgacctgcaagcctgctcgccgattcaggacaacccc
cagcctgccgcttcggacttggccaccatcatctatacctccggcaccaccggcctgccc
aaaggcgtgatgcacagctttggcgccttggggtttgccgccactcgcggcaccgagttg
tttgggctgggggagggcgaccggctgttgtcctacctgccgttgtgccatgtggcggag
cggatgtttgtggaaatggcgtcgatttacactgggcaaaccgtgtatttcgcagaaagc
ctggatacttttctgacggatctgcgtagggcacgtccgaccgcattgtttggcgtgccg
cggatctggaccaaattccagatgggcgtctacgccaagatcccgcaaaagcgcctcgac
accctgctgcgccttccctttatcggcaaacgcgtgggccataaggtactcgccggcctg
ggcctggacgcgttgcgcatcgcactgtccggcgcggcgcctgtgcccgaggcgctgctg
cgctggtaccaacgcctgggcctggatgtgctcgaggtgtatggcatgactgagagctgc
ggctactcccatgtgtgccgccccggccaacagaccctcggctggatcggcctgccgtgc
cccggtgttgaagtgcgcatcgacccctcgggcgaggtgcaggtgcgcagcggtgcgacc
atgctcggctacttcaaggacccgcagaaaacctgcgagaccctcaccgccgatggtttc
ctgcgtactggcgacaaaggcgagcaggatgccgatggccgcctgcgcctgaccgggcgg
ctcaaggaaatcttcaaaaccagcaaaggcaaatacgtggccccggcgccaatcgaaaac
cgcctggccgaacatccgcgtatcgagcaggtgtgtgtggtgggcgatggcctgagcgcg
cctattggtttgtgcgtgttgtcggcgctggaacaggacccgcaagcgctgcgcagcagt
cttgaacgctggctggaacaggtcaacggagcgctggataaacatgagcgtctgcgccaa
ctggtggtggtgaaagacaactgggcagtggaaaacggctttttaaccccgaccttgaag
atcaagcgcaacgtgatcgagtcgacttacggcgctcagtttcaggtttggagcgagcgc
accgagacggttctgtggcaggattag
DBGET
integrated database retrieval system
