Pseudomonas trivialis: AA957_06330
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Entry
AA957_06330 CDS
T04006
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptv
Pseudomonas trivialis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptv03032
]
AA957_06330
03400 DNA repair and recombination proteins [BR:
ptv03400
]
AA957_06330
Enzymes [BR:
ptv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AA957_06330
DNA replication proteins [BR:
ptv03032
]
Prokaryotic type
DNA Topoisomerases
AA957_06330
DNA repair and recombination proteins [BR:
ptv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AA957_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AKS05729
UniProt:
A0A0H5A448
LinkDB
All DBs
Position
complement(1440862..1443483)
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
GPVLTPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTAKGAN
VRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSIAKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVAMARTYIETEFGKKYLPEKPN
VYSSKEGAQEAHEAIRPSDANTEPSKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV
SVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDTLKLIKLDPSQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES
FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPESGMRANQPVMT
DIPCLTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCNGYEIEEGTYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVLEIVPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTK
EQYVQSEVDGKPTGWKAFYDGGKWKVEDKRQGA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtac
ttgggcaacgagtacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaggagcctgccgccaagcgcggcaaggcggccgcgggcgaa
ggtccggtgctcacccctaaagagaaagcgcgcaagcagctggtctcgcgtatgggtgtg
gacccggatcatggctggaaggccaagtacgaaatccttccaggcaaggaaaaggtcatc
gaggagcttcgccggctcgccaaggatgctgacaccatctatctcgcgacggacttggac
cgcgaaggggaagccattgcctggcacctgcgggaagccatcggcggtgacgacagccgc
tacaagcgcgtggtgttcaacgaaatcaccaagaaagccatccaggaagccttctccaag
ccgggtgagctggatatcgaccgcgtcaacgcccagcaggcccgtcgtttcctcgaccgc
gtcgtgggctatatggtctcgccgctgctgtgggcgaaaatcgcccgtggcctgtccgct
ggccgtgtgcaatcggtagcagtgaagctggtggtggaacgtgaacgcgagatccgtgcg
ttcaacccagaagaatattgggaagtccacgccgacctcggcactgccaagggcgccaac
gtgcgcttcgaagtagcccgcgagaaaggcgaggccttcaagccgctgaacgaagcccag
gccatggccgcgctggaaaagctcaaggcgtccagctacagcatcgccaagcgtgaagac
aaaccgaccagcagcaaaccgtcggcacccttcatcacctccaccctgcaacaggccgcg
agcaaccgcctgggctttggtgtgaagaaaaccatgatgatggcccagcgtctgtacgaa
gctggctacatcacttatatgcgtactgactccaccaacctgtcgcaagacgcggtggcg
atggcgcgtacttatattgaaaccgagttcggcaagaagtacctgccggaaaagccgaac
gtctacagcagcaaggaaggcgcacaagaggctcacgaagcgatccgtccttccgacgcc
aacactgagccaagcaagctgagcggcatggagcgcgacgctgagcgcctctacgagctg
atctggcgccagttcctggcgtgccagatgctgccggcgcaatacctgtccaccaccgtg
agcgtgggcgctggtgacttcgagctgcgtgccaagggccgtatcctcaagttcgacggc
tatacccgtgtgatgccgcagatcgccaagcctggcgatgacgacgtgctgccggatatg
gctcagggcgatacgctgaagctgatcaagctcgacccgtcccagcacttcaccaagccg
ccggcgcgttattcggaagccagcctggtgaaagagatggagaagcgcggtattggtcgt
ccttcgacctatgcggcgatcatctcgaccatccaggaccgtggctacgtggcgctgcat
aaccgtcgtttctactcggaaaagatgggcgatatcgtcactgagcgcctgtccgagagc
ttctccaacctcatggactacggcttcaccgccggcatggaagagaacctcgatgacgtg
gcccagggcgaacgcgactggaaaaacgtgctggacgagttctacggcgacttcaagaag
aagctcgaagtagcggaaagtcctgaaagcggcatgcgcgccaaccagccagtgatgact
gacattccgtgcctgacctgcggccgcccgatgcagattcgtactgcgtccaccggcgtg
ttcctcggttgctcgggctacagcctgccgccaaaagagcgctgcaaggccaccgtcaac
ctggtgccgggtgatgaaatcgccgccgacgacgagggtgaatccgagtcgctggtattg
cgtggcaagcaccgttgcccgatctgcagcacggcgatggacgcctacctgctggacgag
aaacacaagctgcacatctgcggtaacaacccggattgcaacggctacgagatcgaagag
ggcacttaccgcatcaagggctatgaaggtccgagcctggaatgcgacaagtgtggcagc
gagatgcagctcaagaccggccgtttcggcaagttcttcgggtgcaccaacccgacctgc
aagaacacccgcaaactgctgaaaagcggtgatgcggcgccgccgaagatggatccggtg
aagatgcctgaactcaagtgcgagaaggtcaacgacacctacatcctgcgtgacggtgct
tcggggctgttcctggctgccagccagttcccgaaaaaccgcgagacccgtgcgccgctg
gtgctggagatcgtgccgcacaaggatgagatcgaccctaagtaccacttcctgtgtgaa
gcgccgaagaaggacccggatggtcgcccagccgtgatccgctacagccgcaagaccaag
gagcagtacgtgcagtcggaagtggacggcaagcctaccggctggaaagcgttctacgac
ggcggcaagtggaaggtcgaagacaagcgccagggcgcttga
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