Pseudomonas trivialis: AA957_06345
Help
Entry
AA957_06345 CDS
T04006
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv00071
Fatty acid degradation
ptv00280
Valine, leucine and isoleucine degradation
ptv00310
Lysine degradation
ptv00362
Benzoate degradation
ptv00380
Tryptophan metabolism
ptv00410
beta-Alanine metabolism
ptv00640
Propanoate metabolism
ptv00650
Butanoate metabolism
ptv00907
Pinene, camphor and geraniol degradation
ptv00930
Caprolactam degradation
ptv01100
Metabolic pathways
ptv01110
Biosynthesis of secondary metabolites
ptv01120
Microbial metabolism in diverse environments
ptv01200
Carbon metabolism
ptv01212
Fatty acid metabolism
Module
ptv_M00087
beta-Oxidation
ptv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AA957_06345 (fadB)
00650 Butanoate metabolism
AA957_06345 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AA957_06345 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AA957_06345 (fadB)
00310 Lysine degradation
AA957_06345 (fadB)
00380 Tryptophan metabolism
AA957_06345 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AA957_06345 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AA957_06345 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AA957_06345 (fadB)
00930 Caprolactam degradation
AA957_06345 (fadB)
Enzymes [BR:
ptv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AA957_06345 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AA957_06345 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AA957_06345 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AA957_06345 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AKS05732
UniProt:
A0A0H5ANI6
LinkDB
All DBs
Position
complement(1445136..1447283)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAHVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacgccatcaaggctgatgcatcgatcaaaggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtaccgaccgtcgctgcgatcaatggcatcgcgttgggcggcggcctggaa
atgtgcctggccgcggacttccgcgtcatgtccgctaccgccaaaatcggcctgcctgaa
gtcaaactgggcatctacccaggtttcggcggcaccgtacgcttgccgcgcctgatcggt
gccgacaacgccatcgagtggatcgccgccggcaaagaaaaccgtgctgaagacgcgctg
aaagtcggtgctgtcgatgccgtggttgccccggacaaactggccgaagccgcactgaac
ctgatcaagggcgccatcagcggcgagtttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaaaggtttc
gtggcaggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagccctggaagtggaagcagcaggcttcgtcaaa
ctggcgaaaacctcggccgcccagagcctgatcggcctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctatgacgaaatcgccaaggacgtgaaacaggccgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcatccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcaaggcctggcggaagccgccaagctg
ctggtcggtcgtgtggacaaaggtcgcatgaccgcagcgaagatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggccacgtcgacttggtggtcgaagcc
gttgtcgagaacccgaaggtcaagcaagcggtactggctgaagtcgaagcccacgttaag
gaagacactatcctggcgtcgaacacctcgactatttccatcagcttgttggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaaatccagcgaactggccgtggctaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaaagtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggccaccacggtcgcgacgtaatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgttcggcgatcgacgcgctctacgaagccaagcgc
ctgggccagaaaaacggcaagggcttctacgcctacgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaggtgtccgacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaaaaatggccagagcttcttcggttaa
DBGET
integrated database retrieval system
