Pseudomonas trivialis: AA957_06890
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Entry
AA957_06890 CDS
T04006
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AA957_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptv03400
]
AA957_06890
Enzymes [BR:
ptv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AA957_06890
DNA repair and recombination proteins [BR:
ptv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AA957_06890
Prokaryotic type
AA957_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKS05837
UniProt:
A0A0H5ANT6
LinkDB
All DBs
Position
complement(1565314..1566006)
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AA seq
230 aa
AA seq
DB search
MTEDDRIKLEPSWKHALREEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGYLQNWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPINWVLPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacgaccgtatcaaactcgaacccagctggaaacacgccctgcgcgaggag
tttgagcagccgtacatggctcagttacgtgagttcctgcgccaggaacatgccgctggc
aaggagatctacccgcccggcccgctgattttcaacgcactcaattccacgccgctggac
aaggtcaaagtggtgatcctcggccaggacccgtaccacggccccggccaggctcatggt
ttgtgtttctcggtgcaaccgggcgtaccgacgccgccgtcgttggtgaatatttataaa
gaactcaagcgcgacctgaacatcgacatccccaaccacggctacctgcaaaactgggct
gaccagggtgtgttgatgctcaacaccaccatgaccgtggagcgcgccaacgccaatgcg
catgcgggcaagggctggcagttctttactgaccgcattatcgaagtggtcagtgagcat
cagccgcacttggtgttcctgctatggggggcacatgcccagggcaaacagaagctgatt
gatgccaccaagcaccttgtgctgacctcggtgcacccgtcgccattgtcggcgtatcgc
gggtttctgggttgcgggcatttcagccgcaccaacaagtttcttgagcagaatggcgag
acgccgatcaattgggtgttgccacctctctga
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