Pseudomonas trivialis: AA957_07345
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Entry
AA957_07345 CDS
T04006
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ptv
Pseudomonas trivialis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptv03021
]
AA957_07345
Transcription machinery [BR:
ptv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AA957_07345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKS05922
UniProt:
A0A0H5AP04
LinkDB
All DBs
Position
1656942..1659788
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DTITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASPEYTLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDK
GRLSPKAHKTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYLELPLGEHAELYPEVSFQSQPDIEEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALIDEARAERERLE
QELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLSGRVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKITPRHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRNQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacacccgccagtatgcgctacggaatgcgcccctcacccgcgtgaggttttcgccgggc
gacaccatcacccatttcgaaggctggaaaatgaccgtgcaggaagtcgacgatgtcgac
ggtttgctggtgtaccacggcctcaatgggcagaacgagcaggtcaccctgccggaaacc
cagctctccaacttcatccagttccgcctggccagcgaccgtctgttcgccgggcagatc
gacccgctcgcctggttctcgctgcgctaccacaccctggaacacaccagccgccaattg
cagtcctcgttgtggggcctgggcggcgtgcgtgcgcaacctatcgcacaccaactgcac
atcgcccgtgaagtcgctgaccgtatcgcgccacgggtattgctggcggatgaagtgggc
ctgggcaagaccatcgaagccggcctggtgatccatcgccaactgctctcgggccgcgcc
aaccgcgtgctgatcctggtcccggaaaacctgcagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtcgcgctgttcgacgaagaacgctttatcgaaagcgatgcc
gccaacccgtttgaagacacccagttggcgctggtcgcgctggagtggctggtggacgac
gagaaggcccaggacgcgctgttcgcggctggttgggatttgctggtggtcgacgaggcc
caccacttggtctggcacgaagaaaaagccagccccgaatacacactggtcgagcaattg
gccgaagtgattcccggcgtgctgctgctcaccgccaccccggaacaactgggccaggac
agccacttcgcgcgcctgcgcctgctggacccgaaccgtttccacgacctgcacgccttc
cgcgccgagagcgagaactaccgcccggtggccgaagccgtgcaggagctgctggacaag
ggtcgcctgtcgccaaaagcgcacaagaccatccagggtttcctcggcaacgaaggtgaa
gcgctgctcaccgccgtcaacgatggcgacaccgaagccagtgcgcgcctggtgcgtgaa
ctgctcgaccgccatggcaccggccgcgtgctgttccgtaatacccgcgccgccgtgcaa
ggcttccccgagcgcaagctgcacgcctacccgctgccgaacccggacgaataccttgag
ctgccgctgggtgagcacgccgagctgtacccggaagtcagctttcagtcgcagccggac
attgaagaagaaaaccgttggtggcgcttcgacccacgggtcgagtggctgatcgaccag
ctgaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggccacggtgttccacgagggc
atgaacatcctcgagcgtgaccgcgctgcggcctatttcgcggatgaagagtttggcgcc
caggtgctgatctgctccgagatcggcagtgaaggccgtaacttccagttctcccaccac
ttggtgctgttcgacctgccgtcccaccctgacttgctggaacagcgcatcggccgtctg
gaccggatcggccagaaacatgtgatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctgaacgcgttcctcaatacctgcccg
accggcaacgccttgcagcatcagttcggcccgcgcctgctgccgctgctggaaaacgcc
gatgacggcgagtggcaagccctgattgacgaggcccgtgccgagcgcgagcgcctggag
caggagctgcacaccggtcgcgaccgcttgctggagctcaactctggtggcgcgggcgaa
ggcgatgcgctggtagaagacatccttgagcaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgcgtttggcatcgacagcgaagaccattcggaaaacgcgctg
atcctcaaacccagcgaaaaaatgctcgacgccagcttccccctgggcgacgacgaaggt
gtgaccatcacctacgaccgtaaccaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttccatgggcaac
accgccgtggcactgatcaagaacaaggcgctcaagccgggcaccgtgttgctggagctg
ctttacgtcagcgaagtggttgcgccgcgcgcgctgcaactgggccgctacctgccaccg
gccgccctgcgctgcctgctggatgccaatggcaacgacctgtcgggccgcgtgtcgttc
gaaaccctcaacgaccagttggaaagcgtgcctcgagccagcgccaacaagtttatccag
gcccagcgcgaccagctgacgccacggatcaacgccggcgaagagaagatcaccccgcgc
cacgccgagcgcgtagccgaggccaaacgtcgcctggcggcggacaccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgtgacagcgagctggttgcc
ctgcgcaatcagcgcgagcaaggcctggccatgctggataaagcggcgttgcgcctggaa
gcgattcgggtgttggtcgcgggttga
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