Pseudomonas trivialis: AA957_07680
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Entry
AA957_07680 CDS
T04006
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv03030
DNA replication
ptv03430
Mismatch repair
ptv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AA957_07680
03430 Mismatch repair
AA957_07680
03440 Homologous recombination
AA957_07680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptv03032
]
AA957_07680
03400 DNA repair and recombination proteins [BR:
ptv03400
]
AA957_07680
Enzymes [BR:
ptv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AA957_07680
DNA replication proteins [BR:
ptv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AA957_07680
DNA repair and recombination proteins [BR:
ptv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AA957_07680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AKS05987
UniProt:
A0A0H5AP65
LinkDB
All DBs
Position
complement(1729439..1732960)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNALSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGLALLGGNPQEAEVLAREWMQVFPDRFYLEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SADEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRERAKVDEEPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFNDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVKTEALKGDQLRWLGDLLKRHRGACPVTMEYTGNDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctacgcctgcacactgagtactccctggtcgacggcctg
gtacggatcaaaccgctggtcaaaaccctggtgggcatgaacatgcctgcggttgcggta
accgatcagaacaacatgtgttccttggtcaagttctacaaaaacgccatgggcgccggc
atcaagccgatctgcggcgccgacctgtggttgtccaacaaagatccggacaacgccctt
agccgtatcagcctgctggcgatgaacggcgtgggttatcgcaacctcaccgaactgatt
tcccgtggctttatcgacggccagcgcaacggctcgatcatcatcgagcgcgagtgggtc
gccgaggccagcgaagggctgatcatgctgtcagccgctaaagagggtgagatcggtctc
gcgctactcggcggcaatcctcaagaagctgaagtgctggcccgcgagtggatgcaggtc
tttcccgaccgtttctacctggaagtccagcgcaccaaccgccccaacgacgaagagcac
ctgcacgccgccgtggccctggccgacaagctgggcgcgccgctggtcgcgaccaacgat
gtgcgcttcatcaagaaagaagacttcgaagcccacgaaacccgcgtgtgcatcggcgaa
ggccgggccctggatgacccgcgtcgctccaaaaattacagcgaagagcagtacctcaaa
agcgccgacgaaatggccgagctgttcagcgacctgcccgaggccctggaaaactcggtc
gaaatcgccaagcgctgcaatatcgaagtgaagctgggcaagcacttcctgcctaacttc
ccgattcccgatggcatgaccattgatgaatacttccgcaaggtgtcgttcgacggcttg
gaagagcgcctcagcgtgctgttgcccaaggacaccactgaggattacgaagccaaacgc
caggtctacgttgaccggctgaatttcgaactggatatcatcatccagatggggttcccc
ggttacttcctgatcgtaatggactttatccagtgggccaaaagcaacggcgtaccggta
ggcccgggccgggggtcaggtgctggctcgctggtggcttacgtacagaagattaccgat
ctcgacccgctggaatatgacctgctgttcgaacggttcctgaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggccgtgaccgcgtcattgagtacgtg
gccgagaaatacggccgcaacgcggtaagccagatcatcaccttcggttccatggccgcc
aaggctgtaatccgcgacgtggcgcgggtgcagggcaagtcctacggcctggcggatcgc
ctgtcgaagatgattccgttcgaagtcggcatgactctggaaaaggcctacgagcaggaa
gaaatcctgcgtgacttcatcaagatcgatgaagaagccgccgaaatctgggacatggcg
cgcaagctcgaaggcgtggtgcgtaacgtcggtaaacacgccggtggtgtggttatcgcg
cctacaaagctcaccgacttttcgccgatttattgcgatgaagaaggcggtggcctggtc
acccagttcgacaaagacgacgtggaggcggccggcctggtgaagttcgacttcctcggc
ctgcggacgctgacgatcatcgactgggcgctgaagaccatcaaccgcgagcgcgccaag
gtcgacgaagagccgctggatattgcgtttatcccgctggacgacaagccgacctaccag
ttgctgcaaaaggccgaaaccacggcggtgttccagcttgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgtctggaagacttgatcgcactggtggcgctgttc
cgtccgggcccgctgcaatcgggcatggtggacgacttcatcaaccgtaagcacggtcgc
gccgagctggcatacccgcactccgactaccaatacgaaggcctcaagcccgtattggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtgatggcc
ggttacaccctcggtggtgcggacatgttgcgtcgcgccatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggcggtttcattgaaggttgtgccaccaacaatattgacgcc
gacctggccggtaacattttcgacctggtagagaaattcgccggttacggctttaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaaggctcactac
ccggcgccgttcatggctgcggtactttcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcaccatgaaactgcgcctcgacgctccggacgtgaacgcc
tcggagttcaagttcacggtgaatgacgaaggccgcatcatttatggcctgggcgcgatc
aaaggcgtgggtgaggggccggtggaagccatcaccgaagcgcgccaggacgggcctttc
aatgacctgttcgacttctgcgcacgggttgacctcaagcgcatcaacaagcgaaccctc
gatggcctgatccgcagtggtgcgctcgaccgtctcggtccgtattttcatgatgagccg
aaggcttaccaggcgaatatcgaccgtaaccgcgccgtattgctcaccgcgatggaagag
gcgatcaaggctgccgaacagaccgcgcgcacccacgacagtggccacgccgacttgttt
ggcggattgttcgtcgaggaagacgcggatgtgtacgccaaccaccgtaaggccaaggaa
ctgaccctgaaggagcgcctcaagggtgagaaagacaccttgggcctgtacctcaccggt
cacccgattgatgaatacgaaggtgagatccggcggttcgcccgccagcgcatcatcgac
ctgaaaccggcgcgggatacgcagaccgtcgccggcatgatcatcgccctgcgggtgatg
aaaaataaaaagggcgacaagatgggctttatcaccctcgacgaccgctcgggccgcatc
gaagcctcactgtttgccgatgcgttccactccgcgcagtcgctgctgcagactgacgcc
atggtggtggtggaaggggaggtcagcaacgacgacttctccggcggcctgcggctgcgg
atcaagcgtgtgatgagcatggaagatgcgcgcaccaatttggccgagagcctgcgcttg
aaggtgaaaaccgaagcgctcaagggcgatcagctacgctggttgggcgacctgctcaaa
cgccaccgtggcgcgtgcccggtgaccatggagtacaccggcaatgacgccaaggccatg
ttgcagtttggcgagacctggcgaattgatcctgctgatggcttgattcaagcattgcgt
gaccagttcggccgtgacaacgtctttctccaataccgttga
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